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Protein Alignment tbrd-3 and Brd8
DIOPT Version :9
Sequence 1: | NP_726307.1 |
Gene: | tbrd-3 / 246604 |
FlyBaseID: | FBgn0050417 |
Length: | 268 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_008770251.2 |
Gene: | Brd8 / 291691 |
RGDID: | 1307003 |
Length: | 1206 |
Species: | Rattus norvegicus |
Alignment Length: | 141 |
Identity: | 43/141 - (30%) |
Similarity: | 68/141 - (48%) |
Gaps: | 24/141 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 YKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAADFAKDIRLIFYNTYLYT 93
|.| ||.:|:...: ...||.||:.||||||::..:..|...|.|:|.:||.|:|.|..:|.
Rat 801 YAN---VFLQPVTDDI--APGYHSIVQRPMDLSTIKKNIENGLIRSTAEFQRDIMLMFQNAVMYN 860
Fly 94 NPDHLCYHMAKQLQIIFEEMYSQVQLYICS--------SGSKVRAEEESSSDESDSSSPEDEVNG 150
:.||..||||.::| .::..|:|.::.: ||...::.....|.....:|.:|.|.
Rat 861 SSDHDVYHMAVEMQ---RDVLEQIQQFLATQLIMQTSESGISAKSLRGRDSTRKQDASEKDSVP- 921
Fly 151 SEVSPSIMGAP 161
||:|
Rat 922 -------MGSP 925
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
tbrd-3 | NP_726307.1 |
Bromo_Brdt_II_like |
13..114 |
CDD:99930 |
32/84 (38%) |
Brd8 | XP_008770251.2 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5076 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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