DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and bet-2

DIOPT Version :9

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001300353.1 Gene:bet-2 / 181257 WormBaseID:WBGene00010199 Length:1209 Species:Caenorhabditis elegans


Alignment Length:358 Identity:66/358 - (18%)
Similarity:111/358 - (31%) Gaps:144/358 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAADFAKD 81
            |..::..:.|...|..|.|||.|:||..|.::||.|::..||||.|::.:|:...|....:|..|
 Worm   560 CSKLLNEIHSVKNKGFAQVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVHD 624

  Fly    82 IRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMY------------------------------SQ 116
            |.|:..|...|.......:..|.:|:..||:.:                              .:
 Worm   625 INLMVDNCCKYNPKGSPAHSNALELRSFFEQRWKLFPRPGVDPIIADSYINQNLVVNTDLIEDER 689

  Fly   117 VQLYICSSGSKVRAEEESSSDE------------------------------------------- 138
            :..|:    |.|:|||:..:::                                           
 Worm   690 INSYL----SAVKAEEKKCAEKLEQLRSMSEGLYTIAMQRREAKLAGNTAPALAQNQLSQLEGLG 750

  Fly   139 ---------------------SDSSSPE----DEVNGSEVSPSIMGAPPSCTPTTECTP-TPDWT 177
                                 |.|.:|.    |::..|.:....:..|.:...:....| ||...
 Worm   751 ISIKSTPMMIPELISPALSVRSSSRAPVPKIIDDIGPSPIKARKISKPRASMASNVSVPYTPTGN 815

  Fly   178 P-----------------PATL-ETSEQQEPFT--------------TEEDLDLH---AKIQQLD 207
            |                 |||: |...||.||.              |.:.::|.   |.|.|:.
 Worm   816 PRGRKPKKSGRPKKNIYSPATVSERISQQPPFEVTPYVSIYGRKVVGTNDKIELSERMASIPQMY 880

  Fly   208 GEVLLHVIHFIQRMEG------AEYCNKELEFD 234
            ...:|.:|.......|      ...|.:|::|:
 Worm   881 ITPILRIIQIGHHNTGKTITSLRSLCEEEIDFN 913

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 31/96 (32%)
bet-2NP_001300353.1 Bromodomain 282..388 CDD:295360
COG5076 429..>661 CDD:227408 31/100 (31%)
Bromo_Brdt_II_like 556..657 CDD:99930 31/96 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X197
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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