DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and baz-2

DIOPT Version :9

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_498673.3 Gene:baz-2 / 176078 WormBaseID:WBGene00001470 Length:1390 Species:Caenorhabditis elegans


Alignment Length:111 Identity:32/111 - (28%)
Similarity:52/111 - (46%) Gaps:26/111 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAADFAKD 81
            |::::..|   ..:..|..|.||::|:|  :..|..|:.:||||.|:|.:.....|.:..|||:|
 Worm  1282 CQLMLDEL---VVQANALPFLEPVNPKL--VPGYKMIISKPMDLKTIRQKNEKLIYETPEDFAED 1341

  Fly    82 IRLIFYNTYLYTNPDH--------------------LCYHMAKQLQ 107
            |.|:|.|...: |.||                    |.|:..|:|:
 Worm  1342 IELMFANCRQF-NIDHSEIGRAGISLHKFFQKRWKQLKYNFTKRLR 1386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 32/111 (29%)
baz-2NP_498673.3 FlgD 35..88 CDD:281896
HAT_MBD 328..401 CDD:238691
DDT 524..>564 CDD:295426
WHIM1 622..670 CDD:292246
WHIM3 899..931 CDD:292248
PHD_BAZ2A_like 1102..1146 CDD:277020
PHD 1155..1199 CDD:214584
Bromo_BAZ2A_B_like 1278..1374 CDD:99935 28/97 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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