DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tbrd-3 and bet-1

DIOPT Version :10

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:NP_001366626.1 Gene:bet-1 / 172054 WormBaseID:WBGene00022473 Length:857 Species:Caenorhabditis elegans


Alignment Length:246 Identity:60/246 - (24%)
Similarity:104/246 - (42%) Gaps:57/246 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PEINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAA 76
            |.:..|..::....:..|:..||.|.||:|.:.|||||||:|::|||||.:::.::.:|.|...:
 Worm   261 PSMKPCLKLLNDFSTKKYQEFAWPFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPS 325

  Fly    77 DFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMYSQVQLYICSSGSKVRAEEESSSDESDS 141
            ||..|:||:..|.:||.......:....:.|.:|:..::::                     .||
 Worm   326 DFEHDVRLMLRNCFLYNPVGDPVHSFGLRFQEVFDRRWAEL---------------------GDS 369

  Fly   142 SSPEDEVNGSEVSPSIMGAPPSCTPTTECTPTPDWTPPATLETSEQQEPFTTEEDLDLHAKIQQL 206
            ||     ..|.|:|  ..||        ..||     |...::|..:||   :|....|.|....
 Worm   370 SS-----RASSVAP--QSAP--------IAPT-----PKVAKSSAPKEP---KESRKEHKKETTF 411

  Fly   207 D-----GEVLLHVIHFIQRMEGAEYCNKELEFDICKLKVHTKRGIRDYLAS 252
            :     .|.|:.:.:.:..:...|        :..|.::...:.|:|.|.|
 Worm   412 EASGAKSEDLMQINNALSMIRERE--------EKLKAELAAAQAIKDKLTS 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 33/100 (33%)
BET 190..252 CDD:435704 11/66 (17%)
bet-1NP_001366626.1 Bromo_Brdt_I_like 39..145 CDD:99929
PLN02967 95..>240 CDD:215521
Bromo_Brdt_II_like 262..363 CDD:99930 33/100 (33%)
Ribosomal_P1_P2_L12p <371..416 CDD:473891 15/67 (22%)
BET 526..592 CDD:435704
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.