DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and Crebbp

DIOPT Version :9

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_006521814.1 Gene:Crebbp / 12914 MGIID:1098280 Length:2451 Species:Mus musculus


Alignment Length:314 Identity:74/314 - (23%)
Similarity:116/314 - (36%) Gaps:81/314 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AKQETERSS-------------------PE--INACKVIIKRLFSSTYKNIAWVFYEPLDPQLLG 46
            ||:|.|.||                   ||  ..|....::.|:....:::.  |.:|:||||||
Mouse  1060 AKEEEENSSNDTASQSTSPSQPRKKIFKPEELRQALMPTLEALYRQDPESLP--FRQPVDPQLLG 1122

  Fly    47 LHDYHEIVREPMDLSTVRHRLNTGCYLSAADFAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFE 111
            :.||.:||:.||||||::.:|:||.|.....:..|:.|:|.|.:||.......|....:|..:||
Mouse  1123 IPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLAEVFE 1187

  Fly   112 EMYSQV----------------QLYICSSGSKVRAEEESSSDESDSSSPE--------------- 145
            :....|                |...|..........:::.....:|||:               
Mouse  1188 QEIDPVMQSLGYCCGRKYEFSPQTLCCYGKQLCTIPRDAAYYSYQNSSPKYGLLADRYHFCEKCF 1252

  Fly   146 DEVNGSEVSPSIMGAPPSCTPTTECTPTPDWTPPATLETSEQQEPFTTEEDLDLHAKIQQLDGEV 210
            .|:.|..|:   :|..||...||......:.....||:    .|||.  :..:...|:.|     
Mouse  1253 TEIQGENVT---LGDDPSQPQTTISKDQFEKKKNDTLD----PEPFV--DCKECGRKMHQ----- 1303

  Fly   211 LLHVIHFIQRMEGAEYCNKELEFDICKLKVHTKRGIRDYLASKGFTGKRVARTK 264
             :.|:|:.........|      |.|..|....|      ....|:.||:..|:
Mouse  1304 -ICVLHYDIIWPSGFVC------DNCLKKTGRPR------KENKFSAKRLQTTR 1344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 35/102 (34%)
CrebbpXP_006521814.1 zf-TAZ 362..429 CDD:366931
KIX 586..666 CDD:366953
PHA03247 <687..1037 CDD:223021
COG5076 942..>1194 CDD:227408 42/135 (31%)
Bromo_cbp_like 1088..1195 CDD:99927 37/108 (34%)
RING_CBP-p300 1207..1289 CDD:276805 15/88 (17%)
PHD_CBP_p300 1291..1322 CDD:277032 7/44 (16%)
HAT_KAT11 1353..>1564 CDD:369758
ZZ_CBP 1716..1756 CDD:239077
ZnF_TAZ 1777..1855 CDD:214717
Med15 1971..>2422 CDD:312941
Creb_binding 2045..2125 CDD:370251
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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