DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and brdt

DIOPT Version :9

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_012817895.2 Gene:brdt / 100144959 XenbaseID:XB-GENE-983868 Length:1013 Species:Xenopus tropicalis


Alignment Length:305 Identity:78/305 - (25%)
Similarity:123/305 - (40%) Gaps:76/305 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EINACKVIIKRLFSSTYKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAAD 77
            ::..|..|:..:.|..:...||.||:.:.|  ..|.|..:.::.||||:|:|.::..|.|....|
 Frog   293 QLKHCNNILNEMMSKKHAEYAWPFYKTVIP--TSLLDCSDAIKHPMDLATIRDKMENGLYKDTQD 355

  Fly    78 FAKDIRLIFYNTYLYTNPDHLCYHMAKQLQIIFEEMY-----------SQVQLYICSSGSKVRAE 131
            ||.|:||:|.|:|.|..||:...:||:::|.:||.|:           |.|:.|      |...|
 Frog   356 FASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKIPDDPLATQSMVERY------KTSTE 414

  Fly   132 E---ESSSDESDSSSPEDE--VNGSEVSPSIMGAPPSCTPTTECTPTP----------------- 174
            |   .|||::|.||..|||  .:.:.:...:..........|| ||..                 
 Frog   415 ESSSSSSSEQSSSSDSEDERAQHLALLQEQLRAVQEQLKALTE-TPISKAKKKSRKGKKKKKKRE 478

  Fly   175 -----------------------------DWTPPATLETSEQQE---PFTTEEDLDLHAKIQQLD 207
                                         :......|..|:::|   |.:.:|...|...|.:|.
 Frog   479 RKKLLKRKSCQGQKKKKVKQKELKKRSIFNDAKKKKLHVSDEEEDVKPMSYDEKRQLSLDINKLP 543

  Fly   208 GEVLLHVIHFIQRMEGA--EYCNKELEFDICKLKVHTKRGIRDYL 250
            ||.|..::|.||..|.:  :....|:|.|...||..|.|.:..|:
 Frog   544 GEKLGRIVHIIQSREPSLKDSNPNEIEIDFETLKQSTLRHLEKYV 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 35/100 (35%)
brdtXP_012817895.2 Bromo_Brdt_I_like 28..134 CDD:99929
Bromodomain 293..392 CDD:413371 35/100 (35%)
BET 526..589 CDD:407211 20/63 (32%)
BRD4_CDT 973..1013 CDD:407248
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000322
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22880
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X197
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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