DRSC/TRiP Functional Genomics Resources

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Protein Alignment tbrd-3 and brd8a

DIOPT Version :9

Sequence 1:NP_726307.1 Gene:tbrd-3 / 246604 FlyBaseID:FBgn0050417 Length:268 Species:Drosophila melanogaster
Sequence 2:XP_017208471.1 Gene:brd8a / 100003763 ZFINID:ZDB-GENE-091113-54 Length:820 Species:Danio rerio


Alignment Length:136 Identity:39/136 - (28%)
Similarity:67/136 - (49%) Gaps:14/136 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YKNIAWVFYEPLDPQLLGLHDYHEIVREPMDLSTVRHRLNTGCYLSAADFAKDIRLIFYNTYLYT 93
            |.|   ||.:|:...:  ...||.||..||||||::..:..|...:.|:|.:||.|:|.|..:|.
Zfish   670 YAN---VFLQPVTDDI--APGYHSIVHRPMDLSTIKKNIENGLIRTTAEFQRDIMLMFQNAVMYN 729

  Fly    94 NPDHLCYHMAKQLQIIFEEMYSQVQLYIC------SSGSKVRAEEESSSDESDSSSPEDEVNGSE 152
            :.||..:|||.::|   .::..|:|.::.      :|.|.:.|:.....:.:....|.|:.....
Zfish   730 SSDHDVFHMAVEMQ---RDVLEQIQQFLATQLIMQTSESGISAKSLRGREANRKQDPNDKDCVPM 791

  Fly   153 VSPSIM 158
            .||:.:
Zfish   792 ASPAFL 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
tbrd-3NP_726307.1 Bromo_Brdt_II_like 13..114 CDD:99930 30/84 (36%)
brd8aXP_017208471.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5076
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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