DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpi and rpiA

DIOPT Version :10

Sequence 1:NP_726309.3 Gene:Rpi / 246599 FlyBaseID:FBgn0050410 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_417389.1 Gene:rpiA / 947407 ECOCYCID:EG11443 Length:219 Species:Escherichia coli


Alignment Length:217 Identity:74/217 - (34%)
Similarity:114/217 - (52%) Gaps:21/217 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DAAKKTAARTAVDQWVTEDTKILGIGSGSTVVYAVQRIAERVWKEGELTDLICVPSSYQARHLIL 71
            |..||.....|: |:|...| |:|:|:|||..:.:..:..   .:|::..  .|.||..:...:.
E. coli     4 DELKKAVGWAAL-QYVQPGT-IVGVGTGSTAAHFIDALGT---MKGQIEG--AVSSSDASTEKLK 61

  Fly    72 DYNLNLGDLDRNPNIDVAIDGADEVDRHMVLIKGGGGCLLQEKVVASCAKHFIVVADYTKNSIRL 136
            ...:::.||:...::.:.:|||||::.||.:|||||..|.:||::||.|:.||.:||.:|....|
E. coli    62 SLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTREKIIASVAEKFICIADASKQVDIL 126

  Fly   137 GEQWCRGVPIEVAPMAYVPIKLHIEALFGGEASLRMAKVKAGPIVTDNGNFLLDWKFIANRE-YD 200
            |:   ..:|:||.|||...:...:..| ||....|..      :||||||.:||   :...| .|
E. coli   127 GK---FPLPVEVIPMARSAVARQLVKL-GGRPEYRQG------VVTDNGNVILD---VHGMEILD 178

  Fly   201 WDEVNRAITLIPGVLETGLFVN 222
            ...:..||..||||:..|||.|
E. coli   179 PIAMENAINAIPGVVTVGLFAN 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpiNP_726309.3 RPI_A 24..231 CDD:238692 68/200 (34%)
rpiANP_417389.1 PRK00702 1..217 CDD:234816 74/217 (34%)

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