DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30403 and CG12768

DIOPT Version :10

Sequence 1:NP_726108.3 Gene:CG30403 / 246595 FlyBaseID:FBgn0050403 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_649431.1 Gene:CG12768 / 40513 FlyBaseID:FBgn0037206 Length:429 Species:Drosophila melanogaster


Alignment Length:278 Identity:51/278 - (18%)
Similarity:93/278 - (33%) Gaps:101/278 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KFVELYGREPCLWNKR-PYLRRA---RSAAYRRIQSGINADIEPYESGLTIQGVKMKIKNLRTGY 83
            :.:||....|.||:.| |:.:|:   ::..:..:....|.:.|..:...|         :||..:
  Fly    12 RLIELVRLNPILWDCRLPHYKRSDKRKAIKWNELGRLFNVNGERVQRTFT---------SLREIF 67

  Fly    84 HQELKKIRTIPGYQPKTPW-FAPLHGFLAEFL--------------------------------- 114
            .:||...:.:...:.|:.| :.....||.|.:                                 
  Fly    68 RRELNHEKMLGTTRFKSKWEYYDAMAFLKEVIRERKSRERIKHGSLDSAPVATGSSNNNNNCVSR 132

  Fly   115 ---------------------DTN----------ELETSIP-QLKRLQIRLTRLKPIKIQ----- 142
                                 |.|          |.::|:| .:..|.:.|::| |:.:|     
  Fly   133 NSSNNNSSSAALDEYQYFAPSDPNNPNNQPQLQPEPKSSLPVTIPSLSLTLSQL-PVALQQQAQH 196

  Fly   143 ---TEIKPDPDDLSVPDRPLDATPSSLFTVLPAPMPVEEPP---------TPPPSVPKIGDIISP 195
               .:::||....|:..:.|   |:||....|||:....|.         :..||:....:..||
  Fly   197 LQALQLQPDVTLTSLQKQSL---PTSLTNATPAPLAQTSPAQVLSSSRSCSSSPSIYIKDEPCSP 258

  Fly   196 VHPDPAPVPIAGNCPLST 213
            ....|..| :.||.|.:|
  Fly   259 AGGCPEEV-MTGNGPEAT 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30403NP_726108.3 MADF_DNA_bdg 24..103 CDD:463144 17/83 (20%)
CG12768NP_649431.1 MADF 12..100 CDD:214738 20/96 (21%)

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