DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30403 and CG5180

DIOPT Version :10

Sequence 1:NP_726108.3 Gene:CG30403 / 246595 FlyBaseID:FBgn0050403 Length:302 Species:Drosophila melanogaster
Sequence 2:NP_650892.2 Gene:CG5180 / 192508 FlyBaseID:FBgn0043457 Length:355 Species:Drosophila melanogaster


Alignment Length:367 Identity:67/367 - (18%)
Similarity:124/367 - (33%) Gaps:110/367 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FSDERTVKFVELYGREPCLWNKR--PYLRR-ARSAAYRRIQSGINADIEPY-ESGLTIQGVKMKI 76
            :|.....:|:|.|..|.|||..:  .|... ||:.:|.|:...:. ::||. :..:.::    ||
  Fly     8 YSRHWLTEFIEQYQEEECLWQPKHNDYSNHTARNKSYDRLVEKLK-EVEPNPDRAMVVR----KI 67

  Fly    77 KNLRTGYHQELKKIRTIPGYQPKTPWFAPLHGFLAEFLDTNELETSIPQLKRLQIRLTRLKPIKI 141
            .:||:.:.:|.:|..|...|..:. |:.....|:|:..         |:...|..:..|...|..
  Fly    68 NSLRSAFRREFRKTSTKGDYATRL-WYYDKLLFIADHK---------PKRHELGSKPKRELHISF 122

  Fly   142 QTEIKPDPDDLSVPDRPLDATPSS-LFTVLP-APMPVEEPPTPPPS--VPKIGDIISPVHPDPAP 202
            ..|...:.:|    |.....|.|. :.:::| :|..|||......:  |...|..:|.:...||.
  Fly   123 DDEESMEFED----DSHHTGTQSQHMESIIPTSPDDVEEVAATANNVVVSSQGATLSTISVTPAE 183

  Fly   203 ---------------------------VPIAGNCPLSTACSISEKSEVLGLGLGVSAAGR----- 235
                                       ...|....::.|.:.....:||.:....|.:.|     
  Fly   184 CVTLVKSEEHQAAEAAAAAAQAHQQMVAHAAAQTSIAAAAAQGHAVKVLEITSLDSNSQREIQQA 248

  Fly   236 ---------------TNGVGLGV------------------------------EMRGEDEFTYFG 255
                           |||...||                              ..|.:||:...|
  Fly   249 VNHLEHHQQQLHLQQTNGQHQGVPTIQIGRDHYQPLFGNAGTTAYTTTAATSTSHRQDDEYDAIG 313

  Fly   256 LSVAAQIRNMPLASAMLMQSKIQYMLSMERRKINGHPGDMDI 297
            ::||:::|::.....::.:..|..:|      .|...|::.:
  Fly   314 VNVASKLRSINPTQRIVAEKLISDVL------FNAQLGNLTV 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30403NP_726108.3 MADF_DNA_bdg 24..103 CDD:463144 22/82 (27%)
CG5180NP_650892.2 MADF_DNA_bdg 16..100 CDD:463144 23/89 (26%)

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