DRSC/TRiP Functional Genomics Resources

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Protein Alignment dany and danr

DIOPT Version :10

Sequence 1:NP_726137.2 Gene:dany / 246593 FlyBaseID:FBgn0050401 Length:275 Species:Drosophila melanogaster
Sequence 2:NP_651343.1 Gene:danr / 43020 FlyBaseID:FBgn0039283 Length:419 Species:Drosophila melanogaster


Alignment Length:180 Identity:41/180 - (22%)
Similarity:55/180 - (30%) Gaps:76/180 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LPPIESFKNCEYHVRVSGTTELD------------------------RRVMSFVDNLWGFEVTGG 52
            |||..:..|..|...:...|:.|                        ||.|:.:.|...||:.. 
  Fly     4 LPPEPTPDNEFYDGNIPSITQTDQIASRQRSQNARALQEEEYDTNHRRRGMAIILNHENFELMS- 67

  Fly    53 IDQFEPLTVISVKREGLARRAGIRVNDIITKI-----------NDANADKL---TLAQAQELIAE 103
                        ||||..|.     .|..|.:           ||...|:|   .||.|.|..::
  Fly    68 ------------KREGTNRD-----RDAATAVLTSMQFDVRVYNDLGRDELFCVLLALASEDHSD 115

  Fly   104 SG-RTVKIFVSGDVDEDSEDEMTVDYWFK-PYGFFSSVNEADRSMLDWES 151
            .. ..|.:...||.|        |.|.:. ||    ||::.      |||
  Fly   116 CDCLLVMLMTHGDDD--------VLYAYDGPY----SVDKL------WES 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
danyNP_726137.2 CENP-B_N 10..62 CDD:461229 13/73 (18%)
danrNP_651343.1 CENP-B_N 18..69 CDD:461229 8/63 (13%)

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