DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30398 and Mitd1

DIOPT Version :9

Sequence 1:NP_726113.1 Gene:CG30398 / 246591 FlyBaseID:FBgn0050398 Length:267 Species:Drosophila melanogaster
Sequence 2:NP_001009714.1 Gene:Mitd1 / 363219 RGDID:1307700 Length:249 Species:Rattus norvegicus


Alignment Length:225 Identity:72/225 - (32%)
Similarity:113/225 - (50%) Gaps:13/225 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ALKCEQTGHIMEAILLYEESIFKLSQM--ADAEPSRRQLCGKYLKMYEARAKQLR---DQVK--G 81
            |::.:......:|::.|:|.|..|.|:  ...|.|:|......:..|..||:.::   ||.|  |
  Rat    22 AVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRSTLRTKISGYMDRAENIKKYLDQEKEDG 86

  Fly    82 HLHTSRMLDHITIEQGARGRSYQRLFGPYLDDAVREAHLNEPHLTEPPHFRNLLNFFEVLVKN-C 145
            ..|     ..|.||:.|.|.||:.||..||.:.|.|..:.:|::.:.....|.|.|.|:|:|. |
  Rat    87 KYH-----KQIKIEENATGFSYESLFREYLQETVTEVWIEDPYIRQTHQLYNFLRFCEMLIKKPC 146

  Fly   146 RYLKYIRLTTRPDATAPKNQLQMLQQMQSDLAGGNIQMNFQMDDSLHDRKIVLSSGVVIKIGRGL 210
            :......||:..:......|...|::::..|....:.:......|:|||:|..::|.:|||||||
  Rat   147 KVRTIHLLTSGDEGFGNTQQSSGLEEIKQSLRSHGVVLEINYSSSIHDREIRFNNGWMIKIGRGL 211

  Fly   211 HYFEPMEGSYSLGLCDFDFRKCLATEVDIW 240
            .||:..:|.:|||.||.|.|.|..|.|||:
  Rat   212 DYFKKPQGRFSLGYCDLDLRPCHETTVDIF 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30398NP_726113.1 MIT 13..83 CDD:294211 17/65 (26%)
MIT_C 97..244 CDD:239148 51/145 (35%)
Mitd1NP_001009714.1 MIT_1 10..86 CDD:239146 16/63 (25%)
MIT_C 97..245 CDD:239148 51/145 (35%)
Important for association with membranes. /evidence=ECO:0000250 168..231 24/62 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340792
Domainoid 1 1.000 104 1.000 Domainoid score I6556
eggNOG 1 0.900 - - E1_KOG4509
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 158 1.000 Inparanoid score I4175
OMA 1 1.010 - - QHG48951
OrthoDB 1 1.010 - - D1494805at2759
OrthoFinder 1 1.000 - - FOG0006049
OrthoInspector 1 1.000 - - otm46030
orthoMCL 1 0.900 - - OOG6_106548
Panther 1 1.100 - - O PTHR21222
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4343
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

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