DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30392 and Plekha8

DIOPT Version :10

Sequence 1:NP_611572.2 Gene:CG30392 / 246587 FlyBaseID:FBgn0050392 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001102705.1 Gene:Plekha8 / 500132 RGDID:1563940 Length:520 Species:Rattus norvegicus


Alignment Length:210 Identity:56/210 - (26%)
Similarity:94/210 - (44%) Gaps:34/210 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ETSLLDEDDVQLDAYLAAYEEIMKFFQLMG-SVFSFVSSDVRSKIDILYALRAKDAEEQEHFNTF 93
            :..||::..:..:|:||:...::.....:| :||:.|..|:...|.   .:..|....:|.|.|.
  Rat   322 DIELLEDSGIPTEAFLASCYAVVPVLDKLGPTVFAPVKMDLVGNIK---KVNQKYITNKEEFTTL 383

  Fly    94 RTMLDYEKEAQLLTQKGYVSGSRTLLRLHRGLDFVYEFLNRIQAIPDDQKTVDVCKEAYDDTLGK 158
            :.::.:|.||.:...:.  |.:..||.|.|||.|:..||..::....|.:|  ....||..||.:
  Rat   384 QKIVLHEVEADVARVRN--SATEALLWLKRGLKFLKGFLTEVKNGEKDIQT--ALNNAYGKTLRQ 444

  Fly   159 HHSFLIRKGARLAMYAMPT-----------RGDLLKKVCSDVEAAKEN-----LPSMLKHMRTNY 207
            ||.:::|....||:.|.|:           .||..|:..|   |..:.     ||:|.|.:..  
  Rat   445 HHGWVVRGVFALALRAAPSYEDFVAALTIKEGDHQKEAFS---AGMQRDLSLYLPAMEKQLAI-- 504

  Fly   208 DRTEDLYTLYDLHSL 222
                 |.|||::|.|
  Rat   505 -----LDTLYEIHGL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30392NP_611572.2 GLTP 39..183 CDD:462575 41/155 (26%)
Plekha8NP_001102705.1 PH_FAPP1_FAPP2 1..100 CDD:269951
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..303
Glycolipid transfer protein homology domain 311..520 56/210 (27%)
GLTP 331..469 CDD:462575 39/144 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.