DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and PRE2

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_015428.1 Gene:PRE2 / 856218 SGDID:S000006307 Length:287 Species:Saccharomyces cerevisiae


Alignment Length:233 Identity:49/233 - (21%)
Similarity:82/233 - (35%) Gaps:56/233 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TTVALKSGDCAVVATQKKVTEKN-IVPETVTHLFRITKDIGCAMTGRIAD--------------- 86
            ||:|.:.....:||...:.|..| :..:||..:..|...:...|.|..||               
Yeast    77 TTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQFWETWLGSQCRLH 141

  Fly    87 -----SRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSM--VLIAYD 144
                 .|..|..|....:|..|:|                          :..|.||  ::..|.
Yeast   142 ELREKERISVAAASKILSNLVYQY--------------------------KGAGLSMGTMICGYT 180

  Fly   145 NEIGPSVYKTDPAG-YFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAIDF 208
            .:.||::|..|..| ...|...| ||:....|...|:..||.:||.|.|:.|.   ..|:||...
Yeast   181 RKEGPTIYYVDSDGTRLKGDIFC-VGSGQTFAYGVLDSNYKWDLSVEDALYLG---KRSILAAAH 241

  Fly   209 KP--NGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD 244
            :.  :|..:.:...::..:......::.|...|:.|::
Yeast   242 RDAYSGGSVNLYHVTEDGWIYHGNHDVGELFWKVKEEE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 46/205 (22%)
PRE2NP_015428.1 proteasome_beta_type_5 76..264 CDD:239730 46/216 (21%)

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