DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and PRE7

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_009512.1 Gene:PRE7 / 852239 SGDID:S000000137 Length:241 Species:Saccharomyces cerevisiae


Alignment Length:225 Identity:44/225 - (19%)
Similarity:87/225 - (38%) Gaps:24/225 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 FSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVA-TQKKVTEKNIVPETVTHLFRITKDIGCA 79
            :|.|.....:|:.|........|.:.:...|.||:| ..:.:|:.:|.......:|....:|..:
Yeast     8 YSSEASNTPIEHQFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMS 72

  Fly    80 MTGRIADSRSQVQKARYEAANFRYKYG-YEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAY 143
            ..|..||..:.|::.:.....:.:.:. .::.::...|.|    |.........|.....::...
Yeast    73 ANGFAADGDALVKRFKNSVKWYHFDHNDKKLSINSAARNI----QHLLYGKRFFPYYVHTIIAGL 133

  Fly   144 DNEIGPSVYKTDPAGYF------SGFKACSVGAKTLEANSYLEKKYKPN-----------LSEEK 191
            |.:...:||..||.|.:      :|..|.|:....|:.....:.:|:|.           ||.|:
Yeast   134 DEDGKGAVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEE 198

  Fly   192 AIQLAISCLSSVLAIDFK-PNGIEIGVVSK 220
            .|:|.....:|......: .:|:||.:|:|
Yeast   199 VIKLVRDSFTSATERHIQVGDGLEILIVTK 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 42/221 (19%)
PRE7NP_009512.1 proteasome_beta_type_1 21..241 CDD:239726 41/212 (19%)

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