DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and PAE1

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_175788.1 Gene:PAE1 / 841822 AraportID:AT1G53850 Length:237 Species:Arabidopsis thaliana


Alignment Length:235 Identity:81/235 - (34%)
Similarity:139/235 - (59%) Gaps:8/235 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRIT 73
            :||.:..|||||||:|||||.:|| :...|.:.:|:.:..|:|.:|::|...:.|.:|..:..|.
plant     8 YDRGVNTFSPEGRLFQVEYAIEAI-KLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEID 71

  Fly    74 KDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAE---MRPLG 135
            ..|||||:|.|||:|:.|:.||.|..|.|:.||..|.|:...:.:.|:...:.:..|   .||.|
plant    72 DHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFG 136

  Fly   136 CSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCL 200
            .|:::..:| |.|||:|.|||:|.|....|.::|:.:..|:|.|::::..:||.::|..:|:|.|
plant   137 VSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDLSLQEAETIAVSIL 200

  Fly   201 SSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKI 240
            ..|:.....||.::|..|:   |.:.:...:|:|..:.::
plant   201 KQVMEEKVTPNNVDIAKVA---PAYHLYTPQEVEAVIARL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 77/211 (36%)
PAE1NP_175788.1 proteasome_alpha_type_5 8..218 CDD:239722 77/211 (36%)

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