DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and PAE2

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_188046.1 Gene:PAE2 / 820649 AraportID:AT3G14290 Length:237 Species:Arabidopsis thaliana


Alignment Length:235 Identity:79/235 - (33%)
Similarity:140/235 - (59%) Gaps:8/235 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRIT 73
            :||.:..|||||||:|||||.:|| :...|.:.:|:.:..|:|.:|::|...:.|.:|..:..|.
plant     8 YDRGVNTFSPEGRLFQVEYAIEAI-KLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEID 71

  Fly    74 KDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAE---MRPLG 135
            ..|||||:|.|||:|:.|:.||.|..|.|:.||..|.|:...:.:.|:...:.:..|   .||.|
plant    72 DHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGEEESMSRPFG 136

  Fly   136 CSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCL 200
            .|:::..:| |.|||:|.|||:|.|....|.::|:.:..|:|.|::::..:::.::|..:|:|.|
plant   137 VSLLIAGHD-ENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFNKDITLQEAETIAVSIL 200

  Fly   201 SSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKI 240
            ..|:.....||.::|..|:   |.:.:...:|:|..::::
plant   201 KQVMEEKVTPNNVDIAKVA---PAYHLYTPQEVEAVISRL 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 75/211 (36%)
PAE2NP_188046.1 proteasome_alpha_type_5 8..218 CDD:239722 75/211 (36%)

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