DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and PAG1

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001323455.1 Gene:PAG1 / 817244 AraportID:AT2G27020 Length:351 Species:Arabidopsis thaliana


Alignment Length:199 Identity:62/199 - (31%)
Similarity:103/199 - (51%) Gaps:12/199 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRI 72
            |:|..:|.|||:||::|:|||.||:.... |.|.:|..|..|:..:|.:..|.::|.:...:..:
plant   109 GYDLSVTTFSPDGRVFQIEYAAKAVDNSG-TVVGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSV 172

  Fly    73 TKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCS 137
            .:..|.|:.|..||.|..|.:|:.||.::...||..:||..|..|:|....:.|....:||.||.
plant   173 HRHAGMAVAGLAADGRQIVARAKSEARSYESVYGDAVPVKELSERVASYVHLCTLYWWLRPFGCG 237

  Fly   138 MVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSS 202
            ::|..||.: ||.:|..:|:|....:...::|.....|.:.:||.   ||||       ::|...
plant   238 VILGGYDRD-GPQLYMIEPSGISYRYFGAAIGKGKQAAKTEIEKL---NLSE-------MTCKEG 291

  Fly   203 VLAI 206
            |:.:
plant   292 VIEV 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 62/199 (31%)
PAG1NP_001323455.1 proteasome_alpha_type_3 107..318 CDD:239720 62/199 (31%)

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