DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and psmb7

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:XP_021324576.1 Gene:psmb7 / 64278 ZFINID:ZDB-GENE-001208-4 Length:286 Species:Danio rerio


Alignment Length:226 Identity:47/226 - (20%)
Similarity:85/226 - (37%) Gaps:52/226 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPE-TVTHLFRITKDIGCAMTG 82
            |..:.::.::..|..:...|...:...|..|:....:.||..||.: ..:.:..|:.:|.|...|
Zfish    26 EADITKLGFSSPAARKTGTTICGIVYKDGVVLGADTRATEGMIVADKNCSKIHYISPNIYCCGAG 90

  Fly    83 RIADSRSQVQ---------------KARYEAAN-------FRYKYGYEMPVDVLCRRIADINQVY 125
            ..||:....|               ..|...||       |||: ||                  
Zfish    91 TAADTEMTTQIISSNLELHSLSTGRLPRVATANRMLKQMLFRYQ-GY------------------ 136

  Fly   126 TQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEE 190
                    :|.::||...|. .||.:|...|.|........::|:.:|.|.:..|.:|:|::.||
Zfish   137 --------IGAALVLGGVDC-TGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDRYRPDMEEE 192

  Fly   191 KAIQLAISCLSSVLAIDF-KPNGIEIGVVSK 220
            .|..|....:::.:..|. ..:.|::.|::|
Zfish   193 DAKSLVRDAIAAGIFNDLGSGSNIDVCVITK 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 45/222 (20%)
psmb7XP_021324576.1 proteasome_beta_type_7 44..232 CDD:239732 45/208 (22%)
Pr_beta_C 235..280 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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