DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and PSMB1

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens


Alignment Length:244 Identity:50/244 - (20%)
Similarity:95/244 - (38%) Gaps:54/244 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GSSAGFDRHITI------FSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEK-NI 61
            |...|.:.|...      |||        |.|     ...|.:|:...|.|:||:..:::|. :|
Human    12 GRDLGMEPHRAAGPLQLRFSP--------YVF-----NGGTILAIAGEDFAIVASDTRLSEGFSI 63

  Fly    62 VPETVTHLFRITKD--IGCAMTGRIAD--SRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADIN 122
            ........:::|..  |||  :|...|  :.:::.:||.:.  :::.....|....:...::.| 
Human    64 HTRDSPKCYKLTDKTVIGC--SGFHGDCLTLTKIIEARLKM--YKHSNNKAMTTGAIAAMLSTI- 123

  Fly   123 QVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYF--SGFKA-------------CSVGAKT 172
             :|::  ...|.....::...|.|...:||..||.|.:  ..|||             ..||.|.
Human   124 -LYSR--RFFPYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKN 185

  Fly   173 LEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAID-FKPNGIEIGVVSK 220
            ::...::.      ||.::|::|......|....| :..:.:.|.:|:|
Human   186 MQNVEHVP------LSLDRAMRLVKDVFISAAERDVYTGDALRICIVTK 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 47/236 (20%)
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 47/226 (21%)

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