DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and PSMA3

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_002779.1 Gene:PSMA3 / 5684 HGNCID:9532 Length:255 Species:Homo sapiens


Alignment Length:258 Identity:77/258 - (29%)
Similarity:123/258 - (47%) Gaps:37/258 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRI 72
            |:|...:.|||:||::|||||.||: :.:.|.:.::..|..|...:|.|..|.....:...||.:
Human     7 GYDLSASTFSPDGRVFQVEYAMKAV-ENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNV 70

  Fly    73 TKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCS 137
            .:.:|.|:.|.:||:||....||.||:|||..:||.:|:..|..|:|.....||..:.:||.|||
Human    71 DRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFGCS 135

  Fly   138 MVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLS-------------- 188
            .:|.:|....|..:|..||:|...|:..|::|.....|.:.:||.....::              
Human   136 FMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMKEMTCRDIVKEVAKIIYI 200

  Fly   189 -----EEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTK--IAEKD 244
                 ::||.:|.:|.:..:      .|| ...:|.|        |.||..|...|  :.|:|
Human   201 VHDEVKDKAFELELSWVGEL------TNG-RHEIVPK--------DIREEAEKYAKESLKEED 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 68/228 (30%)
PSMA3NP_002779.1 proteasome_alpha_type_3 5..217 CDD:239720 66/210 (31%)

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