DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and psma2a

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001019612.1 Gene:psma2a / 554153 ZFINID:ZDB-GENE-050522-479 Length:234 Species:Danio rerio


Alignment Length:236 Identity:78/236 - (33%)
Similarity:133/236 - (56%) Gaps:8/236 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 GFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIV--PETVTHLF 70
            |:...:|.|||.|:|.|:|||..|:| ....:|.:|:.:..|:||:||  :|:|:  .::|..:.
Zfish     5 GYSFSLTTFSPSGKLVQIEYALAAVA-AGAPSVGIKASNGVVLATEKK--QKSILYDEQSVHKVE 66

  Fly    71 RITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLG 135
            .|||.||...:|...|.|..|::||..|..:...|...:|...|.:|:|.:.|.|||:..:||.|
Zfish    67 PITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFG 131

  Fly   136 CSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCL 200
            .|:::..:| |..|.::::||:|.:..:||.::|...:...::|||:|..:|..|.||..||..|
Zfish   132 VSLLIAGWD-EDRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTAILTL 195

  Fly   201 SSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIA 241
            ..........:.||:|:.:::.  ||.|...|::::|..||
Zfish   196 KESFEGQMTEDNIEVGICNEAG--FRRLTPAEVKDYLAAIA 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 71/211 (34%)
psma2aNP_001019612.1 proteasome_alpha_type_2 6..231 CDD:239719 74/230 (32%)

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