DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and Prosbeta2

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_524076.2 Gene:Prosbeta2 / 39628 FlyBaseID:FBgn0023174 Length:272 Species:Drosophila melanogaster


Alignment Length:241 Identity:50/241 - (20%)
Similarity:95/241 - (39%) Gaps:60/241 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 AGFD-----RHITI----FSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIV 62
            |||:     |:.|:    |.|           ....:...|.|.:...|..::....:.||..||
  Fly    12 AGFNFDNCKRNATLLNRGFKP-----------PTTTKTGTTIVGIIYKDGVILGADTRATEGPIV 65

  Fly    63 PE-TVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYT 126
            .: ....:..:.|:|.|...|..||:                    ||..|::..:: :::::.|
  Fly    66 SDKNCAKIHYLAKNIYCCGAGTAADT--------------------EMTTDLISSQL-ELHRLQT 109

  Fly   127 QNAEMRPLGCS----MVLIAYDNEI------------GPSVYKTDPAGYFSGFKACSVGAKTLEA 175
             :.|:|.:..:    .:|..|...|            ||.:|...|.|........::|:.:|.|
  Fly   110 -DREVRVVAANTMLKQMLFRYQGHISAALVLGGVDKTGPHIYSIHPHGSSDKLPYATMGSGSLAA 173

  Fly   176 NSYLEKKYKPNLSEEKAIQLAISCLSSVLAIDF-KPNGIEIGVVSK 220
            .:..|.::||:||||:..:|....::|.:..|. ..:.|::.|:.|
  Fly   174 MTVFESRWKPDLSEEEGKKLVRDAIASGVFNDLGSGSNIDLCVIRK 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 47/236 (20%)
Prosbeta2NP_524076.2 proteasome_beta_type_7 42..228 CDD:239732 42/200 (21%)
Pr_beta_C 231..264 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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