DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and psma7

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_989071.1 Gene:psma7 / 394668 XenbaseID:XB-GENE-974596 Length:248 Species:Xenopus tropicalis


Alignment Length:238 Identity:76/238 - (31%)
Similarity:130/238 - (54%) Gaps:7/238 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRIT 73
            :||.||:|||:|.|:|||||.:|: ::..|.|.::..:..|:..:||...|.....||..:..:.
 Frog     3 YDRAITVFSPDGHLFQVEYAQEAV-KKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALD 66

  Fly    74 KDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSM 138
            :::..|..|..||:|..:.:||.|..:.|......:.|:.:.|.||.:.|.|||:...||.|.|.
 Frog    67 ENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISA 131

  Fly   139 VLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNL--SEEKAIQLAISCLS 201
            :::.:|.:..|.:|:|||:|.:..:||.::|........:|||.|....  :::..|:|.|..|.
 Frog   132 LIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALL 196

  Fly   202 SVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD 244
            .|:....|  .||:.|:.:..| .:||:..|||.::.:| ||:
 Frog   197 EVVQSGGK--NIELAVMRRDQP-LKILNPEEIERYVAEI-EKE 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 66/210 (31%)
psma7NP_989071.1 proteasome_alpha_type_7 3..211 CDD:239724 66/210 (31%)

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