DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and Prosalpha5

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_477202.2 Gene:Prosalpha5 / 36951 FlyBaseID:FBgn0016697 Length:244 Species:Drosophila melanogaster


Alignment Length:241 Identity:69/241 - (28%)
Similarity:133/241 - (55%) Gaps:12/241 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRIT 73
            :||.:..|||||||:|||||.:|| :...|.:.:.:.:..|:|.:|::|...:||.||..:..:.
  Fly     8 YDRGVNTFSPEGRLFQVEYAIEAI-KLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVD 71

  Fly    74 KDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQN-------AEM 131
            |.||||.:|.:||:|:.:::||.|..|..:.|...|.::...:.::.:...:..:       |..
  Fly    72 KHIGCATSGLMADARTLIERARVECQNHWFVYNERMSIESCAQAVSTLAIQFGDSGDSDGAAAMS 136

  Fly   132 RPLGCSMVLIAYDNEIG-PSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQL 195
            ||.|.:::....  |.| |.::..||:|.|....|.::|:.:..|...|:..::|:|:.::||.:
  Fly   137 RPFGVAILFAGI--EAGQPQLWHMDPSGTFVRHGAKAIGSGSEGAQQNLQDLFRPDLTLDEAIDI 199

  Fly   196 AISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIA 241
            :::.|..|:........:|:..::| :..|.:..:.|:|:|:..||
  Fly   200 SLNTLKQVMEEKLNSTNVEVMTMTK-EREFYMFTKEEVEQHIKNIA 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 62/216 (29%)
Prosalpha5NP_477202.2 proteasome_alpha_type_5 8..222 CDD:239722 62/216 (29%)

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