DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30382 and Psmb3

DIOPT Version :9

Sequence 1:NP_001163078.1 Gene:CG30382 / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_036101.1 Gene:Psmb3 / 26446 MGIID:1347014 Length:205 Species:Mus musculus


Alignment Length:215 Identity:39/215 - (18%)
Similarity:79/215 - (36%) Gaps:46/215 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VALKSGDCAVVATQKKV-TEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRY 103
            :|:|..:|..:|..::. .:..:|......:|.:...:...:.|...|.::..|:.::....:..
Mouse    12 MAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYEL 76

  Fly   104 KYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDP--AGY----FSG 162
            |.|.::....|...:|:                    :.|:...||  |.|:|  ||.    |..
Mouse    77 KEGRQIKPYTLMSMVAN--------------------LLYEKRFGP--YYTEPVIAGLDPKTFKP 119

  Fly   163 FKACSV---------------GAKTLEANSYLEKKYKPNLSEEKAIQ-LAISCLSSVLAIDFKPN 211
            | .||:               |..:.:.....|..::||:..|...: ::.:.|::|........
Mouse   120 F-ICSLDLIGCPMVTDDFVVSGTCSEQMYGMCESLWEPNMDPEHLFETISQAMLNAVDRDAVSGM 183

  Fly   212 GIEIGVVSKSDPTFRILDER 231
            |:.:.|:.|...|.|.|..|
Mouse   184 GVIVHVIEKDKITTRTLKAR 203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30382NP_001163078.1 PRE1 7..243 CDD:223711 39/215 (18%)
proteasome_alpha_type_6 8..218 CDD:239723 33/200 (17%)
Psmb3NP_036101.1 proteasome_beta_type_3 6..201 CDD:239728 37/211 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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