Protein Alignment Prosalpha1R and Psmb8

DIOPT Version :10

• Sequence 1: NP_724616.1
• Gene: Prosalpha1R / 246582
• FlyBaseID: FBgn0050382
• Length: 244
• Species: Drosophila melanogaster
• Sequence 2: NP_542945.2
• Gene: Psmb8 / 24968
• RGDID: 3426
• Length: 276
• Species: Rattus norvegicus
• Alignment Length: 225
• Identity: 48/225 - (21%)
• Similarity: 88/225 - (39%)
• Gaps: 17/225 - (7%)

  Fly    21 RLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKN-IVPETVTHLFRITKDIGCAMTGRI 84
            |..|:|.|      ...||:|.|.....:||...:.:..: |....|..:..|...:...|:|..
  Rat    63 RKVQIEMA------HGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCA 121

  Fly    85 ADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSM--VLIAYDNEI 147
            ||.:...:....|...:..:.|..:.|....:.::::...|      |.:|.||  ::..:|.:
  Rat   122 ADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQY------RGMGLSMGSMICGWDKK- 179

  Fly   148 GPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAIDFKPNG 212
            ||.:|..|..|.....:..|.|:....|...::..|:.:||.|:|..||...:......|....|
  Rat   180 GPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGG 244

  Fly   213 IEIGVVSKSDPTFRILDEREIEEHLTKIAE 242
            :......|.|...:: :..::.:.|.|..|
  Rat   245 VVNMYHMKKDGWVKV-ESTDVSDLLHKYRE 273

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prosalpha1R	NP_724616.1	proteasome_alpha_type_6	8..218	CDD:239723	43/199 (22%)
Psmb8	NP_542945.2	proteasome_beta_type_5	73..260	CDD:239730	41/194 (21%)