DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and Psmb5

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_035316.1 Gene:Psmb5 / 19173 MGIID:1194513 Length:264 Species:Mus musculus


Alignment Length:167 Identity:45/167 - (26%)
Similarity:71/167 - (42%) Gaps:20/167 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 TTVALKSGDCAVVATQKKVTE-KNIVPETVTHLFRITKDIGCAMTGRIAD----SRSQVQKAR-Y 96
            ||:|.|.....:||...:.|. ..|..:||..:..|...:...|.|..||    .|...::.| |
Mouse    61 TTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIY 125

  Fly    97 EAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSM--VLIAYDNEIGPSVYKTDPAGY 159
            |..|..     .:.|....:.:|  |.||    :.:.:|.||  ::..:|.. ||.:|..|..|.
Mouse   126 ELRNKE-----RISVAAASKLLA--NMVY----QYKGMGLSMGTMICGWDKR-GPGLYYVDSEGN 178

  Fly   160 FSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLA 196
            .....|.|||:.::.|...:::.|..:|..|:|..||
Mouse   179 RISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLA 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 45/167 (27%)
Psmb5NP_035316.1 proteasome_beta_type_5 60..247 CDD:239730 45/167 (27%)

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