DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30382 and Psmb10

DIOPT Version :9

Sequence 1:NP_001163078.1 Gene:CG30382 / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_038668.2 Gene:Psmb10 / 19171 MGIID:1096380 Length:273 Species:Mus musculus


Alignment Length:184 Identity:41/184 - (22%)
Similarity:80/184 - (43%) Gaps:12/184 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AQENITTVA-LKSGDCAVVATQKKVTEKNIVPE-TVTHLFRITKDIGCAMTGRIADSRSQVQKAR 95
            |::..||:| |...|..::....:.|..::|.: :...:..|...|.|...|..||:....:.|.
Mouse    35 ARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAA 99

  Fly    96 YEAANFRYKYGYEMPVDVLCRRIADINQVYTQN--AEMRPLGCSMVLIAYDNEIGPSVYKTDPAG 158
            .:........|.|       .|:|.:.::..|.  .....:|.|:|:...|.. ||.:|:..|.|
Mouse   100 SKMELHALSTGRE-------PRVATVTRILRQTLFRYQGHVGASLVVGGVDLN-GPQLYEVHPHG 156

  Fly   159 YFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAIDFKPNG 212
            .:|.....::|:....|.:.||.:::||::.|.|.:|.:..:::.:..|....|
Mouse   157 SYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGG 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30382NP_001163078.1 PRE1 7..243 CDD:223711 41/184 (22%)
proteasome_alpha_type_6 8..218 CDD:239723 41/184 (22%)
Psmb10NP_038668.2 20S_bact_beta 39..238 CDD:163402 40/180 (22%)
proteasome_beta_type_7 40..226 CDD:239732 40/179 (22%)
Pr_beta_C 232..267 CDD:289249
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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