DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and Psmb10

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_038668.2 Gene:Psmb10 / 19171 MGIID:1096380 Length:273 Species:Mus musculus


Alignment Length:184 Identity:41/184 - (22%)
Similarity:80/184 - (43%) Gaps:12/184 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AQENITTVA-LKSGDCAVVATQKKVTEKNIVPE-TVTHLFRITKDIGCAMTGRIADSRSQVQKAR 95
            |::..||:| |...|..::....:.|..::|.: :...:..|...|.|...|..||:....:.|.
Mouse    35 ARKTGTTIAGLVFRDGVILGADTRATNDSVVADKSCEKIHFIAPKIYCCGAGVAADTEMTTRMAA 99

  Fly    96 YEAANFRYKYGYEMPVDVLCRRIADINQVYTQN--AEMRPLGCSMVLIAYDNEIGPSVYKTDPAG 158
            .:........|.|       .|:|.:.::..|.  .....:|.|:|:...|.. ||.:|:..|.|
Mouse   100 SKMELHALSTGRE-------PRVATVTRILRQTLFRYQGHVGASLVVGGVDLN-GPQLYEVHPHG 156

  Fly   159 YFSGFKACSVGAKTLEANSYLEKKYKPNLSEEKAIQLAISCLSSVLAIDFKPNG 212
            .:|.....::|:....|.:.||.:::||::.|.|.:|.:..:::.:..|....|
Mouse   157 SYSRLPFTALGSGQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGG 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 41/184 (22%)
Psmb10NP_038668.2 proteasome_beta_type_7 40..226 CDD:239732 40/179 (22%)
Pr_beta_C 231..267 CDD:463597
Blue background indicates that the domain is not in the aligned region.

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