Protein Alignment Prosalpha1R and pbs-3

DIOPT Version :10

• Sequence 1: NP_724616.1
• Gene: Prosalpha1R / 246582
• FlyBaseID: FBgn0050382
• Length: 244
• Species: Drosophila melanogaster
• Sequence 2: NP_494913.1
• Gene: pbs-3 / 173858
• WormBaseID: WBGene00003949
• Length: 204
• Species: Caenorhabditis elegans
• Alignment Length: 187
• Identity: 35/187 - (18%)
• Similarity: 69/187 - (36%)
• Gaps: 46/187 - (24%)

  Fly    38 TTVALKSGDCAVVATQKKVTEK-NIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANF 101
            |.||:...:|..:|:..::.|: ..:......:.::|..:...:.|..:|:|:.::|..:.
 Worm    10 TVVAMAGDECVCIASDLRIGEQMTTIATDQKKVHKVTDKVYVGLAGFQSDARTVLEKIMFR---- 70

  Fly   102 RYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVL--IAYDNEIG---------------- 148
              |..||:                .:|..::|...|.::  :||.:..|
 Worm    71 --KNLYEL----------------RENRNIKPQVLSEMISNLAYQHRFGSYFTEPLVAGLDDTNK 117

  Fly   149 PSVYKTDPAGYFSG---FKACSVGAKTL--EANSYLEKKYKPNLSEEKAIQLAISCL 200
            |.:...|..|..|.   |.|...|.:.|  ...::..:..||:...|...|..:|||
 Worm   118 PYICCMDTIGCVSAPRDFVAVGTGQEYLLGVCENFWRENMKPDELFEATAQSILSCL 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prosalpha1R	NP_724616.1	proteasome_alpha_type_6	8..218	CDD:239723	35/187 (19%)
pbs-3	NP_494913.1	proteasome_beta_type_3	6..200	CDD:239728	35/187 (19%)