DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha1R and PSMA8

DIOPT Version :10

Sequence 1:NP_724616.1 Gene:Prosalpha1R / 246582 FlyBaseID:FBgn0050382 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_653263.2 Gene:PSMA8 / 143471 HGNCID:22985 Length:256 Species:Homo sapiens


Alignment Length:246 Identity:78/246 - (31%)
Similarity:134/246 - (54%) Gaps:17/246 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRIT 73
            :||.||:|||:|.|:|||||.:|: ::..|.|.::..:..|:..:||...|.....||..:..:.
Human     5 YDRAITVFSPDGHLFQVEYAQEAV-KKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALD 68

  Fly    74 KDIGCAMT------GRIADSRSQVQKARYEAANFRYKYGYEMPVDV--LCRRIADINQVYTQNAE 130
            ..:..|..      |..||:|..:.:||.|..:  :|...|.||.|  :.|.||.:.|.|||:..
Human    69 DHVCMAFAVLTIFIGLTADARVVINRARVECQS--HKLTVEDPVTVEYITRFIATLKQKYTQSNG 131

  Fly   131 MRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPN--LSEEKAI 193
            .||.|.|.:::.:|::....:|:|||:|.:..:||.::|........:|||.|..:  .|:.:||
Human   132 RRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAI 196

  Fly   194 QLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLTKIAEKD 244
            :|||..|..|:....|  .||:.::.::.| .::...:|:|.::|:| ||:
Human   197 KLAIKALLEVVQSGGK--NIELAIIRRNQP-LKMFSAKEVELYVTEI-EKE 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha1RNP_724616.1 proteasome_alpha_type_6 8..218 CDD:239723 71/218 (33%)
PSMA8NP_653263.2 proteasome_alpha_type_7 5..219 CDD:239724 71/218 (33%)

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