DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30379 and tmbim1

DIOPT Version :10

Sequence 1:NP_724626.2 Gene:CG30379 / 246578 FlyBaseID:FBgn0050379 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001025668.1 Gene:tmbim1 / 595060 XenbaseID:XB-GENE-984286 Length:347 Species:Xenopus tropicalis


Alignment Length:286 Identity:87/286 - (30%)
Similarity:144/286 - (50%) Gaps:44/286 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PLPENSDRYPPISLSAPPT------ENESQDTNSDPKDGEHLVENGMISHDLIVKSNVFEDPTIR 82
            |.|.::|...|: :...||      :.|..:||    ||    |.|....        ::|..:|
 Frog    84 PEPGHNDPPKPV-MPILPTIPLNTGDGEMYNTN----DG----EGGNFGS--------WDDKAVR 131

  Fly    83 MGFVRKVFGILLAQLLFTLAVIAIFSYHQPTKDFMHENFLLVLVAMIVNIIVLSTIVCVENVRRR 147
            ..|:|:|:.|:..|||.|:.:||||:|.:|...|:.....:...:..|..:....:||.|..|||
 Frog   132 HAFIRRVYAIIAVQLLLTVGIIAIFTYVEPVTSFIRRTPGVYYASYAVFFVTYIVLVCCEGPRRR 196

  Fly   148 HPVNLICLALYTFTMSLLLGTASSQMDSNVVISAVAITTLLVIALSIYAVQTKYDYTAAGGVILT 212
            .|.|:|.||::|..|:.:.||.:|...|..|:.::.||.::.|.::|:..|||.|:|:..|:   
 Frog   197 FPWNIILLAIFTLAMAFMAGTIASFYSSKAVLISMGITAIVTIIVTIFCFQTKVDFTSCAGL--- 258

  Fly   213 FVIILIVLSVCGV------------WMPDFVDSLPITCLCTFIGCFFLIADMQSIVGGNRSEQLD 265
            |.::.||:.|.|:            |:     .:....|...:...||..|.|.:: |||...::
 Frog   259 FAVLGIVMFVTGIVTAIVLAFKYVYWL-----HMLYAALGAIVFTLFLAFDTQLVI-GNRKHTIN 317

  Fly   266 PEEYVFAALTLYVDVVRIFIYILRIL 291
            |||||:.||.:|.|:|.||:.:|:|:
 Frog   318 PEEYVYGALKIYTDIVYIFLNLLQII 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30379NP_724626.2 LFG_like 76..291 CDD:198410 73/226 (32%)
tmbim1NP_001025668.1 LFG_like 124..344 CDD:198410 74/237 (31%)

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