DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30378 and AT3G03000

DIOPT Version :10

Sequence 1:NP_724628.1 Gene:CG30378 / 246577 FlyBaseID:FBgn0050378 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_186950.1 Gene:AT3G03000 / 821161 AraportID:AT3G03000 Length:165 Species:Arabidopsis thaliana


Alignment Length:150 Identity:45/150 - (30%)
Similarity:81/150 - (54%) Gaps:11/150 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTEAQIEEIREAFSLYDKERSGWVSVQQLGGVMRALGESLTEAEIYDLANESNADFGGQVQFKDF 69
            |.:.|:.|:||.|..:|:.:.|.::..:||.::|:||...::.::..|..:::.:..|.|:|.:|
plant    13 LGDEQLAELREIFRSFDQNKDGSLTELELGSLLRSLGLKPSQDQLDTLIQKADRNNNGLVEFSEF 77

  Fly    70 LYVMSKRLEEQNSLVC------LKQAFKIFDRSEVNSFTINEIRMVMTNLGEKMSEEDLRELFQD 128
            :     .|.|.:.:.|      ||..|::|||......|..|:...|..||..::.|:|..:.::
plant    78 V-----ALVEPDLVKCPYTDDQLKAIFRMFDRDGNGYITAAELAHSMAKLGHALTAEELTGMIKE 137

  Fly   129 IDQDKDGKISFNEFVTAMRS 148
            .|:|.||.|.|.|||.|:.|
plant   138 ADRDGDGCIDFQEFVQAITS 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30378NP_724628.1 PTZ00184 1..148 CDD:185504 44/148 (30%)
AT3G03000NP_186950.1 PTZ00184 10..157 CDD:185504 44/148 (30%)

Return to query results.
Submit another query.