DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30378 and cabp4

DIOPT Version :10

Sequence 1:NP_724628.1 Gene:CG30378 / 246577 FlyBaseID:FBgn0050378 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_021334000.1 Gene:cabp4 / 797905 ZFINID:ZDB-GENE-081104-291 Length:268 Species:Danio rerio


Alignment Length:144 Identity:48/144 - (33%)
Similarity:78/144 - (54%) Gaps:5/144 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LTEAQIEEIREAFSLYDKERSGWVSVQQLGGVMRALGESLTEAEIYDLANESNADFGGQVQFKDF 69
            |...:::|:.|||..:|.::.|::..:.:...||.:|...||.|:.::..:....:||.|.|.||
Zfish   119 LLPEELDELLEAFKEFDYDQDGYLHYKDVADCMRTMGYMPTEMELIEIIQQIKMKWGGHVDFDDF 183

  Fly    70 LYVMSKR-LEEQNSLVCLKQ---AFKIFDRSEVNSFTINEIR-MVMTNLGEKMSEEDLRELFQDI 129
            ..:|..| |.|...:|.|::   |||.||.......|..|:: ...|.||||:.:.:|.|:..||
Zfish   184 CELMGPRMLAETAHMVGLRELHCAFKQFDCDGDGRITFEELKESTKTLLGEKLKKGELEEILTDI 248

  Fly   130 DQDKDGKISFNEFV 143
            |.:.||.:.|:|||
Zfish   249 DLNGDGNVDFDEFV 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30378NP_724628.1 PTZ00184 1..148 CDD:185504 48/144 (33%)
cabp4XP_021334000.1 PTZ00184 130..265 CDD:185504 45/133 (34%)

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