DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30378 and Myl1

DIOPT Version :10

Sequence 1:NP_724628.1 Gene:CG30378 / 246577 FlyBaseID:FBgn0050378 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_008765516.1 Gene:Myl1 / 56781 RGDID:1598796 Length:212 Species:Rattus norvegicus


Alignment Length:141 Identity:44/141 - (31%)
Similarity:76/141 - (53%) Gaps:5/141 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EIREAFSLYDKERSGWVSVQQLGGVMRALGESLTEAEIYD-LANESNADFGG-QVQFKDFLYVMS 74
            |.:|||.|:|:.....:::.|:|.|:||||.:.|.||:.. |.|.||.:... :::|:.||.:|.
  Rat    72 EFKEAFLLFDRTGECKITLSQVGDVLRALGTNPTNAEVKKVLGNPSNEEMNAKKIEFEQFLPMMQ 136

  Fly    75 --KRLEEQNSLVCLKQAFKIFDRSEVNSFTINEIRMVMTNLGEKMSEEDLRELFQDIDQDKDGKI 137
              ...::|.......:..::||:....:....|:|.|:..|||||.||::..|... .:|.:|.|
  Rat   137 AISNNKDQGGYEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMKEEEVEALLAG-QEDSNGCI 200

  Fly   138 SFNEFVTAMRS 148
            ::..||..:.|
  Rat   201 NYEAFVKHIMS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30378NP_724628.1 PTZ00184 1..148 CDD:185504 43/139 (31%)
Myl1XP_008765516.1 PTZ00184 72..211 CDD:185504 43/139 (31%)

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