DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30378 and Calm2

DIOPT Version :10

Sequence 1:NP_724628.1 Gene:CG30378 / 246577 FlyBaseID:FBgn0050378 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_059022.1 Gene:Calm2 / 50663 RGDID:2258 Length:149 Species:Rattus norvegicus


Alignment Length:146 Identity:61/146 - (41%)
Similarity:105/146 - (71%) Gaps:0/146 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGSLTEAQIEEIREAFSLYDKERSGWVSVQQLGGVMRALGESLTEAEIYDLANESNADFGGQVQ 65
            |:..|||.||.|.:|||||:||:..|.::.::||.|||:||::.||||:.|:.||.:||..|.:.
  Rat     1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65

  Fly    66 FKDFLYVMSKRLEEQNSLVCLKQAFKIFDRSEVNSFTINEIRMVMTNLGEKMSEEDLRELFQDID 130
            |.:||.:|::::::.:|...:::||::||:......:..|:|.||||||||:::|::.|:.::.|
  Rat    66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130

  Fly   131 QDKDGKISFNEFVTAM 146
            .|.||::::.|||..|
  Rat   131 IDGDGQVNYEEFVQMM 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30378NP_724628.1 PTZ00184 1..148 CDD:185504 61/146 (42%)
Calm2NP_059022.1 PTZ00184 1..149 CDD:185504 61/146 (42%)
Necessary and sufficient for interaction with PCP4. /evidence=ECO:0000250|UniProtKB:P0DP24 77..149 25/70 (36%)

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