DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30378 and Calm1

DIOPT Version :10

Sequence 1:NP_724628.1 Gene:CG30378 / 246577 FlyBaseID:FBgn0050378 Length:148 Species:Drosophila melanogaster
Sequence 2:XP_063117613.1 Gene:Calm1 / 24242 RGDID:2257 Length:155 Species:Rattus norvegicus


Alignment Length:139 Identity:57/139 - (41%)
Similarity:101/139 - (72%) Gaps:0/139 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGSLTEAQIEEIREAFSLYDKERSGWVSVQQLGGVMRALGESLTEAEIYDLANESNADFGGQVQ 65
            |:..|||.||.|.:|||||:||:..|.::.::||.|||:||::.||||:.|:.||.:||..|.:.
  Rat     1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65

  Fly    66 FKDFLYVMSKRLEEQNSLVCLKQAFKIFDRSEVNSFTINEIRMVMTNLGEKMSEEDLRELFQDID 130
            |.:||.:|::::::.:|...:::||::||:......:..|:|.||||||||:::|::.|:.::.|
  Rat    66 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREAD 130

  Fly   131 QDKDGKISF 139
            .|.||::::
  Rat   131 IDGDGQVNY 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30378NP_724628.1 PTZ00184 1..148 CDD:185504 57/139 (41%)
Calm1XP_063117613.1 None

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