DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30375 and teq

DIOPT Version :9

Sequence 1:NP_724665.1 Gene:CG30375 / 246575 FlyBaseID:FBgn0050375 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_648288.2 Gene:teq / 39048 FlyBaseID:FBgn0023479 Length:2792 Species:Drosophila melanogaster


Alignment Length:293 Identity:83/293 - (28%)
Similarity:142/293 - (48%) Gaps:26/293 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 SSPQTQQRSRL---NCQAVARPAPC-----DCGWSFPNR-----IANGVEAGKHEFPSMVGLRDL 172
            ::|:|..:..|   :.:||..|..|     |....:.:|     ..|..:.|:|.:.:.:..|..
  Fly  2505 TTPKTYSQIGLWERSSKAVHTPRRCGIFKDDLTDEYAHREERVVRGNVAQRGRHPWQATIRTRGR 2569

  Fly   173 SSNLPIFCGGSIVSERYIMTAAHCTARQPVASRLLALVGEHDLSTGAESIYAAQYRIQNIINHPG 237
            ......:||..::|:|:::|||||....|..:..:. ||:| .:..|||.....: |:|...|..
  Fly  2570 GGISSHWCGAVVISKRHLLTAAHCLYGSPKGAYFVR-VGDH-YANIAESSEVDSF-IENWYLHEN 2631

  Fly   238 YMETASGNINDIALLQTATPIEWSRGVAPICLPIRQAENSFNYQNVDIMGWGTLGFAAS-KSNTL 301
            :.:....| |||||:...||:::|..|.|||||.:.|| ....:...|.|||::....| .:..|
  Fly  2632 FRKGTHMN-NDIALVVLKTPLKFSDYVQPICLPDKNAE-LVEDRKCTISGWGSIKSGVSTPAQVL 2694

  Fly   302 QKATLLTMDNAVCRSR--FNSSITPSHLCTYDAGGRGQ--DSCQYDSGGPVILRQRERMFQLGVI 362
            ..|.|..:.:.||:..  :.|:::....|   ||...:  |:|:.|||||::....:.....|:|
  Fly  2695 GSAELPILADHVCKQSNVYGSAMSEGMFC---AGSMDESVDACEGDSGGPLVCSDDDGETLYGLI 2756

  Fly   363 SYGRACGQPFGIGVNTRVTSHLNWLWRYIGGSV 395
            |:|:.||.....||..||..:::|::..|..|:
  Fly  2757 SWGQHCGFKNRPGVYVRVNHYIDWIYEKINESL 2789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30375NP_724665.1 CUB 38..>100 CDD:294042
Tryp_SPc 151..386 CDD:214473 72/244 (30%)
Tryp_SPc 152..387 CDD:238113 71/239 (30%)
teqNP_648288.2 CBM_14 65..115 CDD:279884
ChtBD2 136..184 CDD:214696
ChtBD2 215..261 CDD:214696
ChtBD2 284..327 CDD:214696
CBM_14 521..569 CDD:279884
ChtBD2 608..654 CDD:214696
ChtBD2 709..752 CDD:214696
CBM_14 782..830 CDD:279884
ChtBD2 864..909 CDD:214696
CBM_14 942..993 CDD:279884
RCR <1051..1126 CDD:304939
RCR <1116..1210 CDD:304939
ChtBD2 1324..1369 CDD:214696
ChtBD2 1474..1518 CDD:214696
LDLa 2193..2222 CDD:238060
SR 2229..2331 CDD:214555
SRCR 2234..2332 CDD:278931
LDLa 2337..2370 CDD:197566
SR 2382..2480 CDD:214555
SRCR 2386..2480 CDD:278931
Tryp_SPc 2546..2781 CDD:214473 71/242 (29%)
Tryp_SPc 2547..2784 CDD:238113 72/244 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24258
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.