DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30375 and svh-1

DIOPT Version :9

Sequence 1:NP_724665.1 Gene:CG30375 / 246575 FlyBaseID:FBgn0050375 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_501379.2 Gene:svh-1 / 182375 WormBaseID:WBGene00006620 Length:951 Species:Caenorhabditis elegans


Alignment Length:420 Identity:120/420 - (28%)
Similarity:178/420 - (42%) Gaps:80/420 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 SCAQQQCTRFFDLIPNRTINITSFNYPGAIPSGSN---CR---FRLKAPSNHVIYLSCRFELFPD 76
            :|....|.| ||.:.|..|:         ..||.:   ||   |||...|:...||         
 Worm   565 ACGDGSCIR-FDQLCNGQID---------CQSGEDEDYCRANSFRLTNGSDTSGYL--------- 610

  Fly    77 TCGSEFLFISR-----DGDLQFRDGERYC---RMGQVNRI-SNFQTMAFAY---------YSSSP 123
                |.||.||     ...|..:.....|   |:|:...| |...|::..|         ...|.
 Worm   611 ----EVLFRSRWEPICADHLNGKISNSICDAMRLGEHGFILSTNATISSGYNVNCDVDCSIRRSS 671

  Fly   124 QTQQRSRLNC---QAVARPAPC----------DCGWSFPNRIANGVEAGKHEFPSMVGLRDLSSN 175
            ...:.:|::|   ..::..:.|          |...|...|:..|.|.....||....||:.::.
 Worm   672 SCTRHARISCISQNGMSSASQCGLRYVEVNARDAAKSRIARVVGGFETVPGAFPWTAALRNKATK 736

  Fly   176 LPIFCGGSIVSERYIMTAAHCTARQPVASRLLALVGEHD--LSTGAESIYAAQYRIQNIINHPGY 238
            .. .||.||:.:.:::|||||.......|....:||:.|  .:.|.|.|    :.:|.|..:|.|
 Worm   737 AH-HCGASILDKTHLITAAHCFEEDERVSSYEVVVGDWDNNQTDGNEQI----FYLQRIHFYPLY 796

  Fly   239 METASGNINDIALLQTATP-IEWSRGVAPICLPIRQAENSFNYQNVDIMGWGTLGFAASKSNTLQ 302
            .:..|   :|||:|:...| ||::....|||||.:....:...|.| :.|||::|...::  .||
 Worm   797 KDIFS---HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTPGRQCV-VSGWGSMGLRYAE--RLQ 855

  Fly   303 KATLLTMDNAVC--RSRFNSSITPSHLCT-YDAGGRGQDSCQYDSGGPVILRQRERMFQL-GVIS 363
            .|.:..::...|  .|:..||::.|..|. |..|  |.||||.|||||...|:.:..|.| ||||
 Worm   856 AALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEG--GIDSCQGDSGGPFACRREDGAFVLAGVIS 918

  Fly   364 YGRACGQPFGIGVNTRVTSHLNWLWRYIGG 393
            :|..|.|....|:.|.|..:|:|:...|.|
 Worm   919 WGDGCAQKKQPGIYTMVAPYLSWISAIING 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30375NP_724665.1 CUB 38..>100 CDD:294042 16/72 (22%)
Tryp_SPc 151..386 CDD:214473 81/241 (34%)
Tryp_SPc 152..387 CDD:238113 80/241 (33%)
svh-1NP_501379.2 KR 227..306 CDD:214527
LDLa 320..355 CDD:238060
PAN_AP_HGF 373..434 CDD:238532
LDLa 558..590 CDD:197566 9/34 (26%)
SRCR_2 599..681 CDD:382996 20/94 (21%)
Tryp_SPc 713..945 CDD:238113 81/244 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24258
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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