DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30375 and TMPRSS6

DIOPT Version :9

Sequence 1:NP_724665.1 Gene:CG30375 / 246575 FlyBaseID:FBgn0050375 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001275929.1 Gene:TMPRSS6 / 164656 HGNCID:16517 Length:824 Species:Homo sapiens


Alignment Length:483 Identity:124/483 - (25%)
Similarity:183/483 - (37%) Gaps:153/483 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LSCAQQQCTRFFDLIPNR-----------------------TINITSFNYPGAIPSGSNCRFRLK 58
            |.|.|.|.|     |.||                       |||.||             :..|.
Human   386 LPCTQGQWT-----IQNRRLCGLRILQPYAERIPVVATAGITINFTS-------------QISLT 432

  Fly    59 APSNHVIYLSCRFELF--PDTCGSEFLFISRDGDLQFRDGERYCRMGQVNR----ISNFQTMAFA 117
            .|...|.|     .|:  .|.|..|||.......:...||.:.|..|...|    .:.||....:
Human   433 GPGVRVHY-----GLYNQSDPCPGEFLCSVNGLCVPACDGVKDCPNGLDERNCVCRATFQCKEDS 492

  Fly   118 YYSSSPQT--QQRSRLN------CQ----------------AVARPAP----------------C 142
            ...|.|:.  .|...||      ||                .|.:|.|                |
Human   493 TCISLPKVCDGQPDCLNGSDEEQCQEGVPCGTFTFQCEDRSCVKKPNPQCDGRPDCRDGSDEEHC 557

  Fly   143 DCGWSFP-NRIANGVEAGKHEFPSMVGLRDLSSNLPIFCGGSIVSERYIMTAAHCTARQPVASRL 206
            |||...| :||..|..:.:.|:|....|:....::   |||:::::|:::|||||.....:||.:
Human   558 DCGLQGPSSRIVGGAVSSEGEWPWQASLQVRGRHI---CGGALIADRWVITAAHCFQEDSMASTV 619

  Fly   207 LALV------------GEHDLSTGAESIYAAQYRIQNIINHPGYMETASGNINDIALLQTATPIE 259
            |..|            ||            ..:::..::.|| |.|..|.:. |:||||...|:.
Human   620 LWTVFLGKVWQNSRWPGE------------VSFKVSRLLLHP-YHEEDSHDY-DVALLQLDHPVV 670

  Fly   260 WSRGVAPICLPIRQAENSFNYQ---NVDIMGWGTLGFAASK----------------------SN 299
            .|..|.|:|||.|    |..::   :..|.|||.|...|.:                      ||
Human   671 RSAAVRPVCLPAR----SHFFEPGLHCWITGWGALREGALRADAVALFYGWRNQGSETCCCPISN 731

  Fly   300 TLQKATLLTMDNAVCRSRFNSSITPSHLCTYDAGGRGQDSCQYDSGGPVILRQRE-RMFQLGVIS 363
            .|||..:..:...:|...:...:||..||.....|: :|:||.|||||::.:... |.|..|::|
Human   732 ALQKVDVQLIPQDLCSEVYRYQVTPRMLCAGYRKGK-KDACQGDSGGPLVCKALSGRWFLAGLVS 795

  Fly   364 YGRACGQPFGIGVNTRVTSHLNWLWRYI 391
            :|..||:|...||.||:|..::|:.:.:
Human   796 WGLGCGRPNYFGVYTRITGVISWIQQVV 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30375NP_724665.1 CUB 38..>100 CDD:294042 14/63 (22%)
Tryp_SPc 151..386 CDD:214473 78/272 (29%)
Tryp_SPc 152..387 CDD:238113 77/272 (28%)
TMPRSS6NP_001275929.1 SEA 77..177 CDD:307516
CUB 326..440 CDD:238001 16/71 (23%)
LDLa 450..480 CDD:238060 8/29 (28%)
LDLa 486..516 CDD:238060 7/29 (24%)
Ldl_recept_a 520..557 CDD:278486 3/36 (8%)
Tryp_SPc 568..822 CDD:238113 78/275 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 148 1.000 Inparanoid score I4403
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
22.050

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