DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30350 and Cyp1

DIOPT Version :10

Sequence 1:NP_724715.1 Gene:CG30350 / 246556 FlyBaseID:FBgn0050350 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_523366.2 Gene:Cyp1 / 32595 FlyBaseID:FBgn0004432 Length:227 Species:Drosophila melanogaster


Alignment Length:171 Identity:44/171 - (25%)
Similarity:71/171 - (41%) Gaps:24/171 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 PRIYFDLYLKDARPLGRFVVQLYTEAAPLVVLQLIKSCMCNQHSKFMVK-----RLFPNLWLETD 272
            ||::||: ..|..||||.|::|.::..|......  ..:|.....|..|     |:.||...:  
  Fly    67 PRVFFDM-TADNEPLGRIVMELRSDVVPKTAENF--RALCTGEKGFGYKGSIFHRVIPNFMCQ-- 126

  Fly   273 LMLSSDSLLHQPLE----YDAKVIDHG-----ASSYVLSFSKAYVTGFTHHLSFAISFKPLTVVN 328
               ..|...|....    |..|..|..     ..|.:||.:.|...  |:...|.|.......::
  Fly   127 ---GGDFTNHNGTGGKSIYGNKFPDENFELKHTGSGILSMANAGAN--TNGSQFFICTVKTAWLD 186

  Fly   329 GSRVGFGRIVKGSKICECIQSYGTKNGKLSRGLLFTSCGLL 369
            ...|.||.:|:|..:.:.|:|||:::||.|:.::..:.|.|
  Fly   187 NKHVVFGEVVEGLDVVKKIESYGSQSGKTSKKIIVANSGSL 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30350NP_724715.1 Hmw_CFAP97 61..155 CDD:464014
Pro_isomerase 227..367 CDD:459694 36/153 (24%)
Cyp1NP_523366.2 cyclophilin_ABH_like 67..225 CDD:238907 42/167 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.