DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30350 and Ppil3

DIOPT Version :9

Sequence 1:NP_724715.1 Gene:CG30350 / 246556 FlyBaseID:FBgn0050350 Length:369 Species:Drosophila melanogaster
Sequence 2:NP_783638.1 Gene:Ppil3 / 301432 RGDID:631415 Length:161 Species:Rattus norvegicus


Alignment Length:133 Identity:23/133 - (17%)
Similarity:42/133 - (31%) Gaps:36/133 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 LGRFVVQLYTEAAPLVVLQLIKSCMCNQHSKFMVKRLFPNLWLETDLMLSSDSLLHQPLEYDAKV 291
            :|...::::.|..|......:..|..|.::..:..|......::|.               |...
  Rat     9 VGDIKIEVFCERTPKTCENFLALCASNYYNGCVFHRNIKGFMVQTG---------------DPTG 58

  Fly   292 IDHGASS-YVLSFSKAYVTGFTHHLSFAISFK---PLTVVNGSR---------------VGFGRI 337
            ...|.|| :...|...|.....|::...:|..   |.|  |||:               ..||::
  Rat    59 TGRGGSSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNT--NGSQFFITYGKQPHLDMKYTVFGKV 121

  Fly   338 VKG 340
            :.|
  Rat   122 IDG 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30350NP_724715.1 KIAA1430 60..155 CDD:290590
cyclophilin 212..369 CDD:294131 23/133 (17%)
Ppil3NP_783638.1 Cyclophilin_PPIL3_like 1..154 CDD:238909 23/133 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.