DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30345 and slcr-46.1

DIOPT Version :9

Sequence 1:NP_724760.2 Gene:CG30345 / 246553 FlyBaseID:FBgn0050345 Length:496 Species:Drosophila melanogaster
Sequence 2:NP_001033534.2 Gene:slcr-46.1 / 180736 WormBaseID:WBGene00016705 Length:481 Species:Caenorhabditis elegans


Alignment Length:434 Identity:88/434 - (20%)
Similarity:175/434 - (40%) Gaps:98/434 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 VPAIVSLFLGPWSDKFGRR-PILLSTFTGYLFSAIILVVLTQITTAVNISPW-----WFLLSSVP 177
            :..:..:..|.:||..||: |:|:.          ||.||  ::.|:||..|     |.|..:.|
 Worm    81 IACVFGIIYGGYSDHRGRKYPMLIG----------ILSVL--VSNAMNILMWDENTDWPLAWTYP 133

  Fly   178 SVFSGGTCA--LITI--LYCYVSDVATEN-KRAMRMVTMEAALGLGMMAGGVASGYI-------- 229
            :....|...  |:|:  :..|::|...:. ..:.|||.:.....||..   |||.::        
 Worm   134 TAVVTGVLGDFLLTMSCINAYIADEFPDKITLSYRMVVVSIIFSLGSF---VASRFVKDLVKWTS 195

  Fly   230 -----YAATGASILFILVGSII----------------------------SIALLYVYFFVAESL 261
                 ..|.|..:|..||..:|                            |:|          ||
 Worm   196 KPTVMIIAEGGYLLTFLVSLLILDQKKPKTKNCLLKEDESIVTVEGSENQSLA----------SL 250

  Fly   262 KSEDLETGSRIREFFRLDLVKV--LVKTCIRKRENYDRAIIWFVMMSLTLCVFAMEGESTVNYMF 324
            .:...|....:.|..:...|.:  ..|..::.|..:.|..::....:..|..|....|..:...:
 Worm   251 PNSTQENKLSVFEIIKTSFVAIYDAAKIFLQPRAGHRRLFLYLCFAANFLDQFVWGEEKGLLGTY 315

  Fly   325 MR-KQFDYTVQDYSVFNAARVVIQVVGSTIAMILLRRLLGLS---TIMMTLLAFACCVLESTVRA 385
            :| ..|.:....|:.:.:.|.::|:||..:.|:..:|:....   .|.:.:|:...|||   :..
 Worm   316 VRLPPFTWDTSTYADYKSWRPIVQIVGMAVGMLFFKRIFHFRDTFIICLAILSMTGCVL---MIG 377

  Fly   386 TAVYGSEMYLALMVGMMRGVMSPMCKAILSHVTPSSELGKIFSLTTSLQSISPLGAAPLYTAVYQ 450
            .|.....::.:|..|.:.|:::||....::.:....|:||.:::::..|.::.:..:.:...:|.
 Worm   378 LAQASWLIFASLAPGSLHGLLNPMSYTFIACIVEQDEIGKAYAISSVAQKLAGIAQSLVLQNIYI 442

  Fly   451 ATVNFYPGI-------FNFISVGLYFLCFCMSAAVFGIQKSMGS 487
            |||::|.|.       .:|::||:||:...|:.     ::::||
 Worm   443 ATVDWYQGFVWLLMAAISFVAVGIYFIVHVMAK-----RENVGS 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30345NP_724760.2 MFS_1 102..437 CDD:284993 74/375 (20%)
MFS 121..472 CDD:119392 85/415 (20%)
slcr-46.1NP_001033534.2 NAGidase <5..116 CDD:369423 12/46 (26%)
MFS 72..471 CDD:391944 85/417 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333052at33208
OrthoFinder 1 1.000 - - FOG0001349
OrthoInspector 1 1.000 - - otm14635
orthoMCL 1 0.900 - - OOG6_100739
Panther 1 1.100 - - O PTHR23507
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X552
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.920

Return to query results.
Submit another query.