DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30340 and prlhr2a

DIOPT Version :10

Sequence 1:NP_724812.2 Gene:CG30340 / 246550 FlyBaseID:FBgn0050340 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001034615.1 Gene:prlhr2a / 654782 ZFINID:ZDB-GENE-060209-1 Length:370 Species:Danio rerio


Alignment Length:306 Identity:70/306 - (22%)
Similarity:130/306 - (42%) Gaps:51/306 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TFLPLI--------AFGLYGNFSMVYVIATNRSLRSPTNLIIANMAVADLLTLAICPAMFMVNDF 93
            :|.|||        ..|::||:.::|||...:.:.:.||..|.|:|.:|:|..|.|....:...|
Zfish    56 SFKPLIIPCYALVVLVGVFGNYLLLYVICQTKKMHNVTNFFIGNLAFSDMLMCATCVPFTLAYAF 120

  Fly    94 Y-QNYQLGCVGCKLEGFLVVVFLITAVLNLSVVSYDRLTAIVLPMETRLTIRGVQIVVVCTWVSG 157
            . :.:..|...|.|...:..|.:..:|..|:.:..||..|.|.|::.|:::.....::...|:..
Zfish   121 NPRGWVFGRFMCYLVFLIQPVTVYVSVFTLTAIGVDRYYATVHPLKKRISVLACTYLLSGIWILS 185

  Fly   158 ILLASPLAFYRSYRVRVWKNFTERYCKENTSVLPKYW-----------YVLITILVWLPLGIMLI 211
            ..|.:| |...:|.|        .:..|..::..::|           |..:.|...|||..:.|
Zfish   186 CGLVAP-AVAHTYHV--------EFKDEGFTICEEFWMGQEKERLAYAYSTLFITYVLPLSALCI 241

  Fly   212 CYIAIFYKL-------DRYEKRVLSRENPLTVSYKRSVAKTLFIVVVVFAALRLPFTILVVLREK 269
            .|:.|..||       .|.:.:..::.     :.||...:.:.:||..|....||.::..|||  
Zfish   242 SYLCISVKLRNCVVPGHRTQSQAEAQR-----ARKRKTFRLVSLVVAAFGICWLPISVFNVLR-- 299

  Fly   270 YFGEDVSVSSGMQLFWYISQYLMFL----NAAVNPLIYGFNNENFR 311
                |:.:....:.::.:.|.|..|    ::..||.:|.:.::.||
Zfish   300 ----DIDIDLIDKRYFLLIQLLCHLCGMSSSCCNPFLYAWLHDRFR 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30340NP_724812.2 7tmA_BNGR-A34-like 33..314 CDD:320131 70/306 (23%)
TM helix 1 33..59 CDD:320131 10/29 (34%)
TM helix 2 66..91 CDD:320131 9/24 (38%)
TM helix 3 104..134 CDD:320131 8/29 (28%)
TM helix 4 145..166 CDD:320131 3/20 (15%)
TM helix 5 190..219 CDD:320131 9/39 (23%)
TM helix 6 237..267 CDD:320131 8/29 (28%)
TM helix 7 282..307 CDD:320131 6/28 (21%)
prlhr2aNP_001034615.1 7tmA_PrRP_R 59..344 CDD:320516 69/303 (23%)
TM helix 1 60..86 CDD:320516 8/25 (32%)
TM helix 2 93..118 CDD:320516 9/24 (38%)
TM helix 3 132..162 CDD:320516 8/29 (28%)
TM helix 4 173..194 CDD:320516 4/21 (19%)
TM helix 5 220..249 CDD:320516 8/28 (29%)
TM helix 6 269..299 CDD:320516 8/29 (28%)
TM helix 7 312..337 CDD:320516 6/24 (25%)

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