DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30340 and npr-35

DIOPT Version :9

Sequence 1:NP_724812.2 Gene:CG30340 / 246550 FlyBaseID:FBgn0050340 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001023088.1 Gene:npr-35 / 183681 WormBaseID:WBGene00016842 Length:381 Species:Caenorhabditis elegans


Alignment Length:304 Identity:74/304 - (24%)
Similarity:137/304 - (45%) Gaps:38/304 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 TFLPLIAF------GLYGNFSMVYVIATNRSLRSPTNLIIANMAVADLLTLAICPAMFMVNDFYQ 95
            |.|..:|:      |:.||..:|..:..:::|...|:.:|.::|:|||..|.||....::|..:.
 Worm    29 TVLYTVAYGAVFFTGVLGNTFVVLAVWAHKNLNITTDYLILSLALADLFILWICLPTTLINSIFT 93

  Fly    96 NYQLGCVGCKLEGFLVVVFLITAVLNLSVVSYDRLTAI--VLPMETRLTIRGVQIVVVCTWVSGI 158
            .:..|...|:|..:........:|..|..|:.||..||  .|...|.......:.|:...|:...
 Worm    94 EWLWGQFFCRLSTWANASTSFASVYTLVAVTADRYLAICHTLKYNTSWDREYTKYVIFAVWLVAA 158

  Fly   159 LLASPLAFYRSYRVRVWK--NFTERYCKENTSVLPKYWYVLITILV--WLPLGIMLICYIAIFYK 219
            :...|  .:.:|.:.||:  ::..|.|...|.  .|.:::.:.:|:  .:|.|::...|..||..
 Worm   159 IFGIP--NWYNYDLIVWQEGSYGYRLCTSQTD--QKLYFLFVNLLLAFIVPFGLISGLYTRIFIT 219

  Fly   220 LDRYEKRVL---SRENPLTVSYKRSVAKTLFIVVVVFAALRLP----FTILVVLREKYFGEDVS- 276
            :..:....:   :||:.:    |..||..:..|::|||...||    ||...     :|.:..| 
 Worm   220 VSTHRSLAVDARAREDRV----KLRVATMMLTVIIVFACCWLPLYCIFTYFF-----FFADQRSD 275

  Fly   277 ---VSSGMQLFWYISQYLMFLNAAVNPLIYGFNNENFRRAYYQI 317
               ::|  .|...|.|::..|::::||:||...:..:|||:..|
 Worm   276 LFQITS--MLIRPIFQWMSLLSSSLNPIIYIAYSHKYRRAFKSI 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30340NP_724812.2 7tm_4 44..315 CDD:304433 70/293 (24%)
7tm_1 48..303 CDD:278431 64/271 (24%)
npr-35NP_001023088.1 7tm_GPCRs 30..314 CDD:391938 71/298 (24%)
TM helix 1 31..57 CDD:341315 6/25 (24%)
TM helix 2 64..90 CDD:341315 9/25 (36%)
TM helix 3 102..132 CDD:341315 8/29 (28%)
TM helix 4 146..164 CDD:341315 3/19 (16%)
TM helix 5 190..215 CDD:341315 5/24 (21%)
TM helix 6 236..267 CDD:341315 11/34 (32%)
TM helix 7 282..307 CDD:341315 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1308959at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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