DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG30340 and Npy1r

DIOPT Version :9

Sequence 1:NP_724812.2 Gene:CG30340 / 246550 FlyBaseID:FBgn0050340 Length:396 Species:Drosophila melanogaster
Sequence 2:NP_001345884.1 Gene:Npy1r / 18166 MGIID:104963 Length:382 Species:Mus musculus


Alignment Length:305 Identity:75/305 - (24%)
Similarity:136/305 - (44%) Gaps:26/305 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 HKPNGEITWKICTFLPLIAFGLYGNFSMVYVIATNRSLRSPTNLIIANMAVADLLTLAICPAMFM 89
            |.|...|......:..:|..|:.||.:::.:|...:.:|:.||::|.|::.:|||...:|.....
Mouse    33 HLPLAVIFTLALAYGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAVMCLPFTF 97

  Fly    90 VNDFYQNYQLGCVGCKLEGFLVVVFLITAVLNLSVVSYDRLTAIVLPMETRLTIRGVQIVVVCTW 154
            |.....::..|...|||..|:..|.:..::.:|.:::.:|...|:.|...|...|...|.:...|
Mouse    98 VYTLMDHWVFGETMCKLNPFVQCVSITVSIFSLVLIAVERHQLIINPRGWRPNNRHAYIGITVIW 162

  Fly   155 VSGILLASPLAFYRSYRVRVWKN-----FTERY-CKE---NTSVLPKYWYVLITILVWLPLGIML 210
            |..:..:.|...|:......::|     |.::| |.:   :.|....|..:|:.:..:.||..:.
Mouse   163 VLAVASSLPFVIYQILTDEPFQNVSLAAFKDKYVCFDKFPSDSHRLSYTTLLLVLQYFGPLCFIF 227

  Fly   211 ICYIAIFYKLDRYEKRVLSRENPL----TVSYKRSVAKTLFI----VVVVFAALRLPFTILVVLR 267
            |||..|:.:|.|       |.|.:    ...|:.|..|.:.|    :||.||...||.||...:.
Mouse   228 ICYFKIYIRLKR-------RNNMMDKIRDSKYRSSETKRINIMLLSIVVAFAVCWLPLTIFNTVF 285

  Fly   268 EKYFGEDVSVSSGMQLFWYISQYLMFLNAAVNPLIYGFNNENFRR 312
            :  :...:..:....|.:.:......::..|||:.|||.|:||:|
Mouse   286 D--WNHQIIATCNHNLLFLLCHLTAMISTCVNPIFYGFLNKNFQR 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30340NP_724812.2 7tm_4 44..315 CDD:304433 71/286 (25%)
7tm_1 48..303 CDD:278431 63/271 (23%)
Npy1rNP_001345884.1 7tmA_NPY1R 40..330 CDD:320517 72/298 (24%)
TM helix 1 42..66 CDD:320517 5/23 (22%)
TM helix 2 75..97 CDD:320517 7/21 (33%)
TM helix 3 113..135 CDD:320517 5/21 (24%)
TM helix 4 156..172 CDD:320517 3/15 (20%)
TM helix 5 208..231 CDD:320517 6/22 (27%)
TM helix 6 261..283 CDD:320517 9/21 (43%)
TM helix 7 298..323 CDD:320517 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.