DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30340 and prlhr

DIOPT Version :10

Sequence 1:NP_724812.2 Gene:CG30340 / 246550 FlyBaseID:FBgn0050340 Length:396 Species:Drosophila melanogaster
Sequence 2:XP_002940396.1 Gene:prlhr / 100497660 XenbaseID:XB-GENE-994391 Length:343 Species:Xenopus tropicalis


Alignment Length:298 Identity:71/298 - (23%)
Similarity:135/298 - (45%) Gaps:50/298 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LIAF-GLYGNFSMVYVIATNRSLRSPTNLIIANMAVADLLTLAICPAMFMVNDFY-QNYQLGCVG 103
            |:.| |::||:.::|||...:.:.:.||.::.|:|.:|:|..|.|..:.:...|. :.:..|...
 Frog    43 LVVFTGIFGNYLLIYVICRTKKMHNVTNFLVGNLAFSDMLMCATCVPLTLAYVFEPRGWVFGHFL 107

  Fly   104 CKLEGFLVVVFLITAVLNLSVVSYDRLTAIVLPMETRLTIRGVQIVVVCTWVSGILLASPLAFYR 168
            |.....:..|.:..:|..|:|::.||..|.|.|:..||||.....::...|:...|:|:| |...
 Frog   108 CYFVFLMQPVTVYVSVFTLTVIAVDRYHATVYPLRRRLTIPTCAYILAGIWLLSCLMAAP-ALAH 171

  Fly   169 SYRVRVWKNFTERYCKENTSVLPKYW---------YVLITILVW--LPLGIMLICYIAIFYKLDR 222
            :|.|        .:.:.:.|:..::|         |...|:::.  ||..|:.:.|:.|..||  
 Frog   172 TYHV--------EFPQLDFSICEEFWFGMEKKRLAYAYSTLILTYALPFIIIALSYLRISVKL-- 226

  Fly   223 YEKRVLSRENPLTV------SYKRSVAKTLFIVVVVFAALRLPFTILVVLRE--------KYFGE 273
             :.||:. .|...|      :.::...:.|.:||..|....||..|..::::        :||  
 Frog   227 -KNRVVP-GNITNVQAEWDRARRKKTFRLLVLVVGAFGMCWLPLHIFNIMKDIDIHLIDKQYF-- 287

  Fly   274 DVSVSSGMQLFWYISQYLMFLNAAVNPLIYGFNNENFR 311
                    .|...:..:|..::|..|.|:|.:.:::||
 Frog   288 --------NLVQLLCHWLAMMSACTNSLLYAWLHDSFR 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30340NP_724812.2 7tmA_BNGR-A34-like 33..314 CDD:320131 71/298 (24%)
TM helix 1 33..59 CDD:320131 8/18 (44%)
TM helix 2 66..91 CDD:320131 8/24 (33%)
TM helix 3 104..134 CDD:320131 8/29 (28%)
TM helix 4 145..166 CDD:320131 4/20 (20%)
TM helix 5 190..219 CDD:320131 8/39 (21%)
TM helix 6 237..267 CDD:320131 7/29 (24%)
TM helix 7 282..307 CDD:320131 6/24 (25%)
prlhrXP_002940396.1 7tmA_PrRP_R 35..320 CDD:320516 71/298 (24%)
TM helix 1 36..62 CDD:320516 8/18 (44%)
TM helix 2 69..94 CDD:320516 8/24 (33%)
TM helix 3 108..138 CDD:320516 8/29 (28%)
TM helix 4 149..170 CDD:320516 5/21 (24%)
TM helix 5 196..225 CDD:320516 7/28 (25%)
TM helix 6 245..275 CDD:320516 7/29 (24%)
TM helix 7 288..313 CDD:320516 6/24 (25%)

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