DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30339 and rlbp1

DIOPT Version :10

Sequence 1:NP_724813.1 Gene:CG30339 / 246549 FlyBaseID:FBgn0050339 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_001005455.1 Gene:rlbp1 / 448050 XenbaseID:XB-GENE-976303 Length:317 Species:Xenopus tropicalis


Alignment Length:256 Identity:67/256 - (26%)
Similarity:120/256 - (46%) Gaps:19/256 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 AETELNEVEERVPADLKALRDWLAKQPH-----LRARQD------DQFLVGFLRGCKFSLEKTKS 68
            |:.||||.||:..:.:|.||..:.::.:     .:|..|      |.|.:.|:|..||.:.:...
 Frog    48 AKDELNETEEKRESAVKELRALVQEKANAGEELCKAVADKVKDKGDDFFLRFIRARKFDVSRAYE 112

  Fly    69 KLDHFYTIKTLMPELFGKRLVDERNLILCRSGTYVRLPKPWGTDGPRLQLTNYEKFDPKEFKLLD 133
            .|..:...:...|||| :.|..|.......:| |..:......:|..:.|.|.|.:|.:|....:
 Frog   113 LLKGYVNFRQQYPELF-EDLTPEAVRSTIEAG-YPGILTSRDKNGRVILLFNIESWDYEEITFDE 175

  Fly   134 LFRYQTMITEQSIREDDHSNISGYVEIVDMAKMSLSFLAQLDFTLIKRMGIFAEKAQPTRLKGVH 198
            :.|...:|.| |:.|::.:.|:|:..|.:....::...:.:..:.:|:|....:.:.|.|.|.||
 Frog   176 ILRAYCIILE-SLLENEETQINGFCIIENFKGFTMQQASGIKPSELKKMVDMLQDSFPARFKAVH 239

  Fly   199 LINCPKEGVALLNLAKSLMPSKLQQRFHVY-KNLEQLNEVIPREYLPEEYGGN----NGRI 254
            .|:.|.......|:.|..:.|||.:|..|: .:||...:.|..:.||.::|||    :|:|
 Frog   240 FIHQPWYFTTTYNVVKPFLKSKLLERVFVHGDDLEGFYKEIDADILPADFGGNLPKYDGKI 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30339NP_724813.1 CRAL_TRIO_N 28..70 CDD:215024 11/52 (21%)
CRAL_TRIO 109..249 CDD:459890 35/140 (25%)
rlbp1NP_001005455.1 CRAL_TRIO_N 60..117 CDD:215024 12/56 (21%)
SEC14 141..292 CDD:469559 38/152 (25%)

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