DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30339 and pinta

DIOPT Version :10

Sequence 1:NP_724813.1 Gene:CG30339 / 246549 FlyBaseID:FBgn0050339 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_651042.1 Gene:pinta / 42635 FlyBaseID:FBgn0038966 Length:273 Species:Drosophila melanogaster


Alignment Length:276 Identity:70/276 - (25%)
Similarity:125/276 - (45%) Gaps:18/276 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SAELRRIAETELNEVEERVPADLKALRDWLAKQPHLRARQDDQFLVGFLRGCKFSLEKTKSKLDH 72
            |:..|::|.|:.:  .|||.|.::.|.|||...|.:......:.|..|||..||.:|:.|.||..
  Fly     6 SSSKRQVATTDGD--PERVLAQVQDLSDWLVANPQINGCNTFENLHFFLRTSKFDVERAKKKLKT 68

  Fly    73 FYTIKTLMPELFGKR---LVDERNLILCRSGTYVRLPKPWGTDGPR--LQLTNYEKFDPKEFKLL 132
            ||.::....|.|..|   |.:.::|:  :.|.::    |.|.|..:  :.:......|||.....
  Fly    69 FYQMRAERTEWFDNRDPQLPEIQDLL--KLGVFL----PIGPDAEQRMVVVIRTAAHDPKLHSQN 127

  Fly   133 DLFRYQTMITEQSIREDDHSNISGYVEIVDMAKMSLSFLAQLDFTLIKRMGIFAEKAQPTRLKGV 197
            ::|:...||.:..::.|..:...|.|.|:||..:.|....|::..|||| .:.:..|.|.:.|.:
  Fly   128 NVFKTSKMILDLLLKLDPETCARGMVAILDMQGVQLGHALQMNPKLIKR-SVESWTAYPCQPKLL 191

  Fly   198 HLINCPKEGVALLNLAKSLMPSKLQQRFHVYKNLEQLNEVIPREYLPEEYGGNNGRIADIQAEAE 262
            ...|.|:.....||..:..|..|::.|..|.:.    ...:..:.||:|.||......::..:.:
  Fly   192 EFTNAPRHVNFFLNTFRIFMTPKIRSRLFVRRE----GTSVSCDQLPKELGGQGLSYMELSVKWK 252

  Fly   263 KKLLSYESYFAEDSQY 278
            :.:.....::.|..:|
  Fly   253 QLVEENADFYVEQDKY 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30339NP_724813.1 CRAL_TRIO_N 28..70 CDD:215024 14/41 (34%)
CRAL_TRIO 109..249 CDD:459890 34/141 (24%)
pintaNP_651042.1 SEC14 87..239 CDD:469559 38/162 (23%)

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