Protein Alignment CG30339 and retm

DIOPT Version :9

• Sequence 1: NP_724813.1
• Gene: CG30339 / 246549
• FlyBaseID: FBgn0050339
• Length: 308
• Species: Drosophila melanogaster
• Sequence 2: NP_001260132.1
• Gene: retm / 33899
• FlyBaseID: FBgn0031814
• Length: 707
• Species: Drosophila melanogaster
• Alignment Length: 352
• Identity: 70/352 - (19%)
• Similarity: 123/352 - (34%)
• Gaps: 89/352 - (25%)

  Fly     1 MANLRPLS----AELRRIAETELNEVE--ERVPA-----DLKALRDWLAKQPH------LRARQD 48
            :..|.|:.    .|||::    |:.|:  ||||:     ...|.|||...|.:      ||.|::
  Fly   214 LGQLSPMQESKLLELRKM----LDGVDDLERVPSYQTILRFLAARDWHVSQAYAMLCDSLRWRRE 274

  Fly    49 ---DQFLVGFLRGCKFSLEKTKSKLDHFYTIKTLMPELFGKRLVDERNLILCRSG--TYVRLPKP 108
               |..|..:        .|....::||       |..:.....|.|.:.:.|.|  ....|.|.
  Fly   275 HRIDALLAEY--------SKPAVVVEHF-------PGGWHHLDKDGRPVYILRLGHMDVKGLLKS 324

  Fly   109 WGTDGPRLQLTNYEKFDPKEFKLLDLFRYQTMITEQSIREDDHSNISGYVEIVDMAKMSLSFLAQ 173
            .|.||                    |.|....|.|:.|::.:.|     .|.::...::.|.|..
  Fly   325 LGMDG--------------------LLRLALHICEEGIQKINES-----AERLEKPVLNWSLLVD 364

  Fly   174 LDFTLIK---RMGIFA--------EKAQPTRLKGVHLINCPKEGVALLNLAKSLMPSKLQQRFHV 227
            |:...::   |.||.|        |:..|..:..|.::..|:.......:..:.:....:.:|..
  Fly   365 LEGLSMRHLWRPGIKALLNIIETVERNYPETMGRVLVVRAPRVFPIAWTIVSAFIDEHTRSKFLF 429

  Fly   228 Y-----KNLEQLNEVIPREYLPEEYGGNNGRIADIQAEAEKKLLSYESYFAEDSQYGVD------ 281
            |     ...:.|.:.:..|.:|:..||....:........|.|....|....|.:...:
  Fly   430 YGPDCAHMKDGLAQYLDEEIVPDFLGGPCKTMIHEGGLVPKTLYKMNSLEDHDDEVTAELPTTAA 494

  Fly   282 -EQLRPGKRVNADSIFGAEGSFRKLDI 307
             :.|.||||::|:........::.:|:
  Fly   495 AQALVPGKRLSANQQHDHRNLYKSVDL 521

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG30339	NP_724813.1	CRAL_TRIO_N	28..70	CDD:215024	11/55 (20%)
		CRAL_TRIO	109..250	CDD:279044	27/156 (17%)
retm	NP_001260132.1	PRELI	17..173	CDD:282550
		CRAL_TRIO_N	222..268	CDD:215024	14/49 (29%)
		CRAL_TRIO	293..456	CDD:279044	35/194 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG1471
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.810